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Meso-scale turbulence was originally observed experimentally in various suspensions of swimming bacteria, as well as in the collective motion of active colloids. The corresponding large-scale dynamical patterns were reproduced in a simple…

Soft Condensed Matter · Physics 2021-03-30 Vasco M. Worlitzer , Gil Ariel , Avraham Be'er , Holger Stark , Markus Bär , Sebastian Heidenreich

A collection of rings made of active Brownian particles (ABPs) for different packing fractions and activities is investigated using computer simulations. We show that active rings display an emergent dynamic clustering instead of the…

Soft Condensed Matter · Physics 2024-02-27 Ligesh Theeyancheri , Subhasish Chaki , Tapomoy Bhattacharjee , Rajarshi Chakrabarti

We study the survival/extinction phase transition for contact processes with quenched disorder. The disorder is given by a locally finite random graph with vertices indexed by the integers that is assumed to be invariant under index shifts…

Probability · Mathematics 2025-08-06 Benedikt Jahnel , Lukas Lüchtrath , Christian Mönch

The study of spreading processes often analyzes networks at different resolutions, e.g., at the level of individuals or countries, but it is not always clear how properties at one resolution can carry over to another. Accordingly, in this…

Physics and Society · Physics 2024-12-04 Baike She , Matthew Hale

Mesh-like structures, such as mucus gel or cytoskeleton networks, are ubiquitous in biological systems. These intricate structures are composed of cross-linked, semi-flexible bio-filaments, crucial to numerous biological processes. In many…

Soft Condensed Matter · Physics 2024-01-10 Yeongjin Kim , Won Kyu Kim , Jae-Hyung Jeon

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

Combinatorics · Mathematics 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher

Via computer simulations we study kinetics of pattern formation in a two-dimensional active matter system. Self-propulsion in our model is incorporated via the Vicsek-like activity, i.e., particles have the tendency of aligning their…

Soft Condensed Matter · Physics 2020-08-26 Saikat Chakraborty , Subir K. Das

Defective interfering particles (DIPs) are virus-like particles that occur naturally during virus infections. These particles are defective, lacking essential genetic materials for replication, but they can interact with the wild-type virus…

Quantitative Methods · Quantitative Biology 2024-02-16 Qiantong Liang , Johnny Yang , Wai-Tong Louis Fan , Wing-Cheong Lo

Biomembranes, which are mainly composed of neutral and charged lipids, exhibit a large variety of functional structures and dynamics. Here, we report a coarse-grained molecular dynamics (MD) simulation of the phase separation and…

Soft Condensed Matter · Physics 2016-11-07 Hiroaki Ito , Yuji Higuchi , Naofumi Shimokawa

Elastic MicroPhase Separation (EMPS) provides a simple route to create soft materials with homogeneous microstructures by leveraging the supersaturation of crosslinked polymer networks with liquids. At low supersaturation, network…

Recently, a framework for analyzing time series by constructing an associated complex network has attracted significant research interest. One of the advantages of the complex network method for studying time series is that complex network…

Chaotic Dynamics · Physics 2015-06-04 Ruoxi Xiang , Jie Zhang , Xiao-ke Xu , Michael Small

A network as a substrate for dynamic processes may have its own dynamics. We propose a model for networks which evolve together with diffusing particles through a coupled dynamics, and investigate emerging structural property. The model…

Statistical Mechanics · Physics 2009-11-10 Sang-Woo Kim , Jae Dong Noh

Disease awareness in infection dynamics can be modeled with adaptive contact networks whose rewiring rules reflect the attempt by susceptibles to avoid infectious contacts. Simulations of this type of models show an active phase with…

Adaptation and Self-Organizing Systems · Physics 2012-12-06 Stefan Wieland , Tomas Aquino , Ana Nunes

The decentralized patch distribution mechanism holds significant promise as an alternative to its centralized counterpart. For the purpose of accurately evaluating the performance of the decentralized patch distribution mechanism and based…

Social and Information Networks · Computer Science 2023-02-27 Lu-Xing Yang , Xiaofan Yang , Qingyi Zhu , Chenquan Gan

We investigate a new class of optical mesh periodic structures that are discretized in both the transverse and longitudinal directions. These networks are composed of waveguide arrays that are discretely coupled while phase elements are…

In this work we have characterized the phase behaviour and the dynamics of bidimensional mixtures of active and passive Brownian particles. We have evaluated state diagrams at several concentrations of the passive components finding that,…

Soft Condensed Matter · Physics 2025-11-12 Diego Rogel Rodriguez , Francisco Alarcon , Raul Martinez , Jorge Ramirez , Chantal Valeriani

Active particles, including swimming microorganisms, autophoretic colloids and droplets, are known to self-organize into ordered structures at fluid-solid boundaries. The entrainment of particles in the attractive parts of their spontaneous…

Soft Condensed Matter · Physics 2018-07-04 Shashi Thutupalli , Delphine Geyer , Rajesh Singh , Ronojoy Adhikari , Howard Stone

Resilience and robustness are important properties in the reliability and attack-tolerance analysis of networks. In recent decades, various qualitative and heuristic-based quantitative approaches have made significant contributions in…

Optimization and Control · Mathematics 2022-12-15 Milad Dehghani Filabadi

Switching on high activity in a relatively dense system of active Janus colloids, we observe fast clustering, followed by cluster aggregation towards full phase separation. The phase separation process is however interrupted when large…

Soft Condensed Matter · Physics 2019-09-04 Marjolein N. van der Linden , Lachlan C. Alexander , Dirk G. A. L. Aarts , Olivier Dauchot

Recent advances have shown that introducing dependency interactions between two superconducting networks can trigger abrupt, hysteretic normal-superconductor phase transitions. In this study, we demonstrate that such behavior can also arise…