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The task of finding an extension to a given partial drawing of a graph while adhering to constraints on the representation has been extensively studied in the literature, with well-known results providing efficient algorithms for…

Computational Geometry · Computer Science 2023-02-21 Sujoy Bhore , Robert Ganian , Liana Khazaliya , Fabrizio Montecchiani , Martin Nöllenburg

We study two problems related to recovering causal graphs from interventional data: (i) $\textit{verification}$, where the task is to check if a purported causal graph is correct, and (ii) $\textit{search}$, where the task is to recover the…

Machine Learning · Computer Science 2022-10-11 Davin Choo , Kirankumar Shiragur , Arnab Bhattacharyya

Graph signals are functions of the underlying graph. When the edge-weight between a pair of nodes is high, the corresponding signals generally have a higher correlation. As a result, the signals can be represented in terms of a graph-based…

Signal Processing · Electrical Eng. & Systems 2024-09-09 Rishabh Ravi , Kaushani Majumder , Kalp Vyas , Satish Mulleti

Motivated by the theorem of Gy\H ori and Lov\'asz, we consider the following problem. For a connected graph $G$ on $n$ vertices and $m$ edges determine the number $P(G,k)$ of unordered solutions of positive integers $\sum_{i=1}^k m_i = m$…

Combinatorics · Mathematics 2023-10-11 Yair Caro , Balázs Patkós , Zsolt Tuza , Máté Vizer

We consider the problem of finding an edge in a hidden undirected graph $G = (V, E)$ with $n$ vertices, in a model where we only allowed queries that ask whether or not a subset of vertices contains an edge. We study the non-adaptive model…

Data Structures and Algorithms · Computer Science 2022-07-07 Ron Kupfer , Noam Nisan

We consider the problem of detecting a cycle in a directed graph that grows by arc insertions, and the related problems of maintaining a topological order and the strong components of such a graph. For these problems, we give two…

Data Structures and Algorithms · Computer Science 2011-12-06 Michael A. Bender , Jeremy T. Fineman , Seth Gilbert , Robert E. Tarjan

A connected set in a graph is a non-empty set of vertices that induces a connected subgraph. In an infinite lattice, a connected set is often referred to as a lattice animal, whose enumeration up to isomorphism is a classical problem in…

Combinatorics · Mathematics 2025-11-11 Hongxia Ma , Xian'an Jin , Meiqiao Zhang

Network reconstruction consists in retrieving the hidden interaction structure of a system from observations. Many reconstruction algorithms have been proposed, although less research has been devoted to describe their theoretical…

We give the first almost-linear time algorithm for computing the \emph{maximal $k$-edge-connected subgraphs} of an undirected unweighted graph for any constant $k$. More specifically, given an $n$-vertex $m$-edge graph $G=(V,E)$ and a…

Data Structures and Algorithms · Computer Science 2023-07-04 Thatchaphol Saranurak , Wuwei Yuan

An obstacle representation of a graph $G$ is a set of points in the plane representing the vertices of $G$, together with a set of polygonal obstacles such that two vertices of $G$ are connected by an edge in $G$ if and only if the line…

Combinatorics · Mathematics 2017-07-18 Martin Balko , Josef Cibulka , Pavel Valtr

Circle graphs are the intersection graphs of chords in a circle. This paper presents the first sub-quadratic recognition algorithm for the class of circle graphs. Our algorithm is O(n + m) times the inverse Ackermann function, {\alpha}(n +…

Data Structures and Algorithms · Computer Science 2012-11-01 Emeric Gioan , Christophe Paul , Marc Tedder , Derek Corneil

Motivation: Molecular interaction networks summarize complex biological processes as graphs, whose structure is informative of biological function at multiple scales. Simultaneously, omics technologies measure the variation or activity of…

Quantitative Methods · Quantitative Biology 2020-12-24 Ramin Hasibi , Tom Michoel

The future of main memory appears to lie in the direction of new technologies that provide strong capacity-to-performance ratios, but have write operations that are much more expensive than reads in terms of latency, bandwidth, and energy.…

Data Structures and Algorithms · Computer Science 2017-10-10 Naama Ben-David , Guy E. Blelloch , Jeremy T. Fineman , Phillip B. Gibbons , Yan Gu , Charles McGuffey , Julian Shun

We determine an asymptotic formula for the number of labelled 2-connected (simple) graphs on $n$ vertices and $m$ edges, provided that $m-n\to\infty$ and $m=O(n\log n)$ as $n\to\infty$. This is the entire range of $m$ not covered by…

Combinatorics · Mathematics 2011-05-27 Graeme Kemkes , Cristiane M. Sato , Nicholas Wormald

We propose a simple and natural approximation algorithm for the problem of finding a 2-edge-connected spanning subgraph of minimum total edge cost in a graph. The algorithm maintains a spanning forest starting with an empty edge set. In…

Data Structures and Algorithms · Computer Science 2018-11-21 Stephan Beyer , Markus Chimani , Joachim Spoerhase

We study recovering a 1D order from a noisy, locally sampled pairwise comparison matrix under a tight query budget. We recast the task as reconstructing a sparse, noisy line graph and present, to our knowledge, the first method that…

Data Structures and Algorithms · Computer Science 2025-11-13 Fuming Yang , Yaron Meirovitch , Jeff W. Lichtman

We present an optimal oracle for answering connectivity queries in undirected graphs in the presence of at most three vertex failures. Specifically, we show that we can process a graph $G$ in $O(n+m)$ time, in order to build a data…

Data Structures and Algorithms · Computer Science 2025-04-28 Evangelos Kosinas

The Path Contraction and Cycle Contraction problems take as input an undirected graph $G$ with $n$ vertices, $m$ edges and an integer $k$ and determine whether one can obtain a path or a cycle, respectively, by performing at most $k$ edge…

Data Structures and Algorithms · Computer Science 2024-03-12 R. Krithika , V. K. Kutty Malu , Prafullkumar Tale

A connected set in a graph is a subset of vertices whose induced subgraph is connected. Although counting the number of connected sets in a graph is generally a \#P-complete problem, it remains an active area of research. In 2020, Vince…

Combinatorics · Mathematics 2025-04-04 Hongxia Ma , Xian'an Jin , Weiling Yang , Meiqiao Zhang

Subgraphs reveal information about the geometry and functionalities of complex networks. For scale-free networks with unbounded degree fluctuations, we obtain the asymptotics of the number of times a small connected graph occurs as a…

Probability · Mathematics 2020-06-09 Remco van der Hofstad , Johan S. H. van Leeuwaarden , Clara Stegehuis