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Cross-modal retrieval methods build a common representation space for samples from multiple modalities, typically from the vision and the language domains. For images and their captions, the multiplicity of the correspondences makes the…

Computer Vision and Pattern Recognition · Computer Science 2021-06-15 Sanghyuk Chun , Seong Joon Oh , Rafael Sampaio de Rezende , Yannis Kalantidis , Diane Larlus

Soil compaction is critical in construction engineering to ensure the stability of structures like road embankments and earth dams. Traditional methods for determining optimum moisture content (OMC) and maximum dry density (MDD) involve…

Artificial Intelligence · Computer Science 2025-12-10 Caner Erden , Alparslan Serhat Demir , Abdullah Hulusi Kokcam , Talas Fikret Kurnaz , Ugur Dagdeviren

The success of drug discovery and development relies on the precise prediction of molecular activities and properties. While in silico molecular property prediction has shown remarkable potential, its use has been limited so far to assays…

Biomolecules · Quantitative Biology 2024-09-04 Maximilian G. Schuh , Davide Boldini , Stephan A. Sieber

We introduce the Kernel-Elastic Autoencoder (KAE), a self-supervised generative model based on the transformer architecture with enhanced performance for molecular design. KAE is formulated based on two novel loss functions: modified…

Machine Learning · Computer Science 2024-03-26 Haote Li , Yu Shee , Brandon Allen , Federica Maschietto , Victor Batista

Machine learning (ML) of quantum mechanical properties shows promise for accelerating chemical discovery. For transition metal chemistry where accurate calculations are computationally costly and available training data sets are small, the…

Materials Science · Physics 2017-11-07 Jon Paul Janet , Heather J. Kulik

Designing de novo 3D molecules with desirable properties remains a fundamental challenge in drug discovery and molecular engineering. While diffusion models have demonstrated remarkable capabilities in generating high-quality 3D molecular…

Machine Learning · Computer Science 2026-01-15 Lianghong Chen , Dongkyu Eugene Kim , Mike Domaratzki , Pingzhao Hu

Masked Autoencoders (MAE) play a pivotal role in learning potent representations, delivering outstanding results across various 3D perception tasks essential for autonomous driving. In real-world driving scenarios, it's commonplace to…

Computer Vision and Pattern Recognition · Computer Science 2024-08-26 Jian Zou , Tianyu Huang , Guanglei Yang , Zhenhua Guo , Tao Luo , Chun-Mei Feng , Wangmeng Zuo

Pre-training strategies based on self-supervised learning (SSL) have proven to be effective pretext tasks for many downstream tasks in computer vision. Due to the significant disparity between medical and natural images, the application of…

Masked Autoencoders (MAEs) learn generalizable representations for image, text, audio, video, etc., by reconstructing masked input data from tokens of the visible data. Current MAE approaches for videos rely on random patch, tube, or…

Computer Vision and Pattern Recognition · Computer Science 2022-11-17 Wele Gedara Chaminda Bandara , Naman Patel , Ali Gholami , Mehdi Nikkhah , Motilal Agrawal , Vishal M. Patel

Molecule pretraining has quickly become the go-to schema to boost the performance of AI-based drug discovery. Naturally, molecules can be represented as 2D topological graphs or 3D geometric point clouds. Although most existing pertaining…

Machine Learning · Computer Science 2025-02-10 Shengchao Liu , Weitao Du , Zhiming Ma , Hongyu Guo , Jian Tang

While investigating methods to predict small molecule potencies, we found random forests or support vector machines paired with extended-connectivity fingerprints (ECFP) consistently outperformed recently developed methods. A detailed…

Biomolecules · Quantitative Biology 2023-10-03 James H. Notwell , Michael W. Wood

We present a quality-aware multimodal recognition framework that combines representations from multiple biometric traits with varying quality and number of samples to achieve increased recognition accuracy by extracting complimentary…

Computer Vision and Pattern Recognition · Computer Science 2021-12-14 Sobhan Soleymani , Ali Dabouei , Fariborz Taherkhani , Seyed Mehdi Iranmanesh , Jeremy Dawson , Nasser M. Nasrabadi

Machine learning (ML) is revolutionising drug discovery by expediting the prediction of small molecule properties essential for developing new drugs. These properties -- including absorption, distribution, metabolism and excretion (ADME)--…

Machine Learning · Computer Science 2024-08-02 Alex G. C. de Sá , David B. Ascher

Multimodal molecular models often suffer from 3D conformer unreliability and modality collapse, limiting their robustness and generalization. We propose MuMo, a structured multimodal fusion framework that addresses these challenges in…

Machine Learning · Computer Science 2025-10-29 Zihao Jing , Yan Sun , Yan Yi Li , Sugitha Janarthanan , Alana Deng , Pingzhao Hu

Machine learning based methods have shown potential for optimizing existing molecules with more desirable properties, a critical step towards accelerating new chemical discovery. Here we propose QMO, a generic query-based molecule…

Machine Learning · Computer Science 2022-04-21 Samuel Hoffman , Vijil Chenthamarakshan , Kahini Wadhawan , Pin-Yu Chen , Payel Das

A reliable prediction of 3D protein structures from sequence data remains a big challenge due to both theoretical and computational difficulties. We have previously shown that our kinetostatic compliance method (KCM) implemented into the…

Computational Engineering, Finance, and Science · Computer Science 2017-12-27 Pouya Tavousi , Morad Behandish , Horea T. Ilies , Kazem Kazerounian

This study proposes an Artificial Intelligence (AI) driven methodology for predicting a combination of brazed ceramic-metal composite materials. Multiple machine learning (ML) algorithms are compared with the deep learning (DL) model. The…

Applied Physics · Physics 2025-10-14 Sunita Khod , Vinay Kamma , Ravi Kumar Verma , Mayank Goswami

Foundational models have emerged as a powerful paradigm in deep learning field, leveraging their capacity to learn robust representations from large-scale datasets and effectively to diverse downstream applications such as classification.…

Instrumentation and Methods for Astrophysics · Physics 2026-03-11 Cristobal Donoso-Oliva , Ignacio Becker , Pavlos Protopapas , Guillermo Cabrera-Vives , Martina Cádiz-Leyton , Daniel Moreno-Cartagena

We present an extension to masked autoencoders (MAE) which improves on the representations learnt by the model by explicitly encouraging the learning of higher scene-level features. We do this by: (i) the introduction of a perceptual…

Computer Vision and Pattern Recognition · Computer Science 2023-03-29 Samyakh Tukra , Frederick Hoffman , Ken Chatfield

Multimodal learning faces two major challenges: modality imbalance and data noise, which significantly affect the robustness and generalization ability of models. Existing methods achieve modality balance by suppressing dominant modalities,…

Multimedia · Computer Science 2025-11-17 Zijing Xu , Yunfeng Kou , Kunming Wu , Hong Liu