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We bridge two research directions on graph neural networks (GNNs), by formalizing the relation between heterophily of node labels (i.e., connected nodes tend to have dissimilar labels) and the robustness of GNNs to adversarial attacks. Our…

Machine Learning · Computer Science 2022-07-26 Jiong Zhu , Junchen Jin , Donald Loveland , Michael T. Schaub , Danai Koutra

This paper studies the vulnerability of Graph Neural Networks (GNNs) to adversarial attacks on node features and graph structure. Various methods have implemented adversarial training to augment graph data, aiming to bolster the robustness…

Machine Learning · Computer Science 2025-09-03 Jinluan Yang , Ruihao Zhang , Zhengyu Chen , Fei Wu , Kun Kuang

Graph Neural Networks (GNNs) excel at relational reasoning but face two persistent challenges: the lack of interpretable attribution for heterogeneous node types, and the computational overhead of message passing over large, noisy graphs.…

Machine Learning · Computer Science 2026-05-12 Seungwoo Kum

Multi-view learning has progressed rapidly in recent years. Although many previous studies assume that each instance appears in all views, it is common in real-world applications for instances to be missing from some views, resulting in…

Machine Learning · Computer Science 2022-08-30 Pengfei Zhu , Xinjie Yao , Yu Wang , Meng Cao , Binyuan Hui , Shuai Zhao , Qinghua Hu

Graph Neural Networks (GNNs) have been broadly applied in many urban applications upon formulating a city as an urban graph whose nodes are urban objects like regions or points of interest. Recently, a few enhanced GNN architectures have…

Machine Learning · Computer Science 2023-06-22 Congxi Xiao , Jingbo Zhou , Jizhou Huang , Tong Xu , Hui Xiong

Graph neural networks (GNNs) have emerged as a powerful tool for modeling graph-structured data. However, existing GNNs often struggle with heterophilic graphs, where connected nodes tend to have dissimilar features or labels. While…

Machine Learning · Computer Science 2026-02-10 Ruizhong Qiu , Ting-Wei Li , Gaotang Li , Hanghang Tong

Heterogeneous graph convolutional networks have gained great popularity in tackling various network analytical tasks on heterogeneous network data, ranging from link prediction to node classification. However, most existing works ignore the…

Social and Information Networks · Computer Science 2022-08-15 Pengyang Yu , Chaofan Fu , Yanwei Yu , Chao Huang , Zhongying Zhao , Junyu Dong

This study proposes a novel heterogeneous graph convolutional neural network (HGCNN) to handle complex brain fMRI data at regional and across-region levels. We introduce a generic formulation of spectral filters on heterogeneous graphs by…

Computer Vision and Pattern Recognition · Computer Science 2023-02-24 Jinghan Huang , Moo K. Chung , Anqi Qiu

Adversarial attacks present a significant risk to the integrity and performance of graph neural networks, particularly in tasks where graph structure and node features are vulnerable to manipulation. In this paper, we present a novel model,…

Machine Learning · Computer Science 2025-11-04 Shakib Khan , A. Ben Hamza , Amr Youssef

As a variant of Graph Neural Networks (GNNs), Unfolded GNNs offer enhanced interpretability and flexibility over traditional designs. Nevertheless, they still suffer from scalability challenges when it comes to the training cost. Although…

Machine Learning · Computer Science 2024-03-28 Yongyi Yang , Jiaming Yang , Wei Hu , Michał Dereziński

Federated graph learning is a widely recognized technique that promotes collaborative training of graph neural networks (GNNs) by multi-client graphs.However, existing approaches heavily rely on the communication of model parameters or…

Machine Learning · Computer Science 2025-05-06 Hao Zhang , Xunkai Li , Yinlin Zhu , Lianglin Hu

Predicting genetic perturbations enables the identification of potentially crucial genes prior to wet-lab experiments, significantly improving overall experimental efficiency. Since genes are the foundation of cellular life, building gene…

Quantitative Methods · Quantitative Biology 2025-05-09 Changxi Chi , Jun Xia , Jingbo Zhou , Jiabei Cheng , Chang Yu , Stan Z. Li

The success of graph neural networks stimulates the prosperity of graph mining and the corresponding downstream tasks including graph anomaly detection (GAD). However, it has been explored that those graph mining methods are vulnerable to…

Cryptography and Security · Computer Science 2023-07-18 Yulin Zhu , Yuni Lai , Kaifa Zhao , Xiapu Luo , Mingquan Yuan , Jun Wu , Jian Ren , Kai Zhou

The crime forecasting is an important problem as it greatly contributes to urban safety. Typically, the goal of the problem is to predict different types of crimes for each geographical region (like a neighborhood or censor tract) in the…

Machine Learning · Computer Science 2021-09-28 Chenyu Wang , Zongyu Lin , Xiaochen Yang , Jiao Sun , Mingxuan Yue , Cyrus Shahabi

Recently, deep neural network models for graph-structured data have been demonstrating to be influential in recommendation systems. Graph Neural Network (GNN), which can generate high-quality embeddings by capturing graph-structured…

Social and Information Networks · Computer Science 2021-03-11 Ziheng Duan , Yueyang Wang , Weihao Ye , Zixuan Feng , Qilin Fan , Xiuhua Li

In representation learning on graph-structured data, many popular graph neural networks (GNNs) fail to capture long-range dependencies, leading to performance degradation. Furthermore, this weakness is magnified when the concerned graph is…

Machine Learning · Computer Science 2024-03-07 Mengying Jiang , Guizhong Liu , Yuanchao Su , Xinliang Wu

Hypergraph neural networks (HGNN) have recently become attractive and received significant attention due to their excellent performance in various domains. However, most existing HGNNs rely on first-order approximations of hypergraph…

Artificial Intelligence · Computer Science 2024-01-11 Maolin Wang , Yaoming Zhen , Yu Pan , Yao Zhao , Chenyi Zhuang , Zenglin Xu , Ruocheng Guo , Xiangyu Zhao

Graph Neural Networks (GNNs) have enjoyed wide spread applications in graph-structured data. However, existing graph based applications commonly lack annotated data. GNNs are required to learn latent patterns from a limited amount of…

Machine Learning · Computer Science 2023-03-22 Wenqi Wei , Mu Qiao , Divyesh Jadav

Over the past decade, Graph Neural Networks (GNNs) have achieved great success on machine learning tasks with relational data. However, recent studies have found that heterophily can cause significant performance degradation of GNNs,…

Machine Learning · Computer Science 2025-05-20 Sitao Luan , Qincheng Lu , Chenqing Hua , Xinyu Wang , Jiaqi Zhu , Xiao-Wen Chang

Graph Neural Networks (GNNs) have demonstrated remarkable proficiency in modeling data with graph structures, yet recent research reveals their susceptibility to adversarial attacks. Traditional attack methodologies, which rely on…

Machine Learning · Computer Science 2025-06-23 Wenlun Zhang , Enyan Dai , Kentaro Yoshioka