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Large language models (LLMs) have demonstrated remarkable in-context reasoning capabilities across a wide range of tasks, particularly with unstructured inputs such as language or images. However, LLMs struggle to handle structured data,…

Machine Learning · Computer Science 2025-02-20 Jintang Li , Ruofan Wu , Yuchang Zhu , Huizhe Zhang , Liang Chen , Zibin Zheng

Graph Neural Networks (GNNs) are powerful to learn the representation of graph-structured data. Most of the GNNs use the message-passing scheme, where the embedding of a node is iteratively updated by aggregating the information of its…

Machine Learning · Computer Science 2020-07-28 Shuo Zhang , Lei Xie

Graphs have become a crucial way to represent large, complex and often temporal datasets across a wide range of scientific disciplines. However, when graphs are used as input to machine learning models, this rich temporal information is…

Graph Neural Networks (GNNs) have recently been applied to graph learning tasks and achieved state-of-the-art (SOTA) results. However, many competitive methods run GNNs multiple times with subgraph extraction and customized labeling to…

Machine Learning · Computer Science 2023-02-14 Lecheng Kong , Yixin Chen , Muhan Zhang

Learning the structure of Directed Acyclic Graphs (DAGs) presents a significant challenge due to the vast combinatorial search space of possible graphs, which scales exponentially with the number of nodes. Recent advancements have redefined…

Machine Learning · Computer Science 2024-11-01 Klea Ziu , Slavomír Hanzely , Loka Li , Kun Zhang , Martin Takáč , Dmitry Kamzolov

Recent deep learning models have moved beyond low-dimensional regular grids such as image, video, and speech, to high-dimensional graph-structured data, such as social networks, brain connections, and knowledge graphs. This evolution has…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-22 Lingxiao Ma , Zhi Yang , Youshan Miao , Jilong Xue , Ming Wu , Lidong Zhou , Yafei Dai

Graph Neural Networks (GNNs) have shown promising results in various tasks, among which link prediction is an important one. GNN models usually follow a node-centric message passing procedure that aggregates the neighborhood information to…

Machine Learning · Computer Science 2022-01-17 Baole Ai , Zhou Qin , Wenting Shen , Yong Li

Graph neural networks (GNNs) have been attracting increasing popularity due to their simplicity and effectiveness in a variety of fields. However, a large number of labeled data is generally required to train these networks, which could be…

Machine Learning · Computer Science 2020-10-26 Shengding Hu , Zheng Xiong , Meng Qu , Xingdi Yuan , Marc-Alexandre Côté , Zhiyuan Liu , Jian Tang

This paper presents TAG, an automatic system to derive optimized DNN training graph and its deployment onto any device topology, for expedited training in device- and topology- heterogeneous ML clusters. We novelly combine both the DNN…

Machine Learning · Computer Science 2023-02-14 Shiwei Zhang , Xiaodong Yi , Lansong Diao , Chuan Wu , Siyu Wang , Wei Lin

Knowledge graphs have emerged to be promising datastore candidates for context augmentation during Retrieval Augmented Generation (RAG). As a result, techniques in graph representation learning have been simultaneously explored alongside…

Information Retrieval · Computer Science 2025-03-20 Md Shahir Zaoad , Niamat Zawad , Priyanka Ranade , Richard Krogman , Latifur Khan , James Holt

Graph embedding provides an efficient solution for graph analysis by converting the graph into a low-dimensional space which preserves the structure information. In contrast to the graph structure data, the i.i.d. node embedding can be…

Machine Learning · Computer Science 2017-05-16 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

The high cost of data labeling often results in node label shortage in real applications. To improve node classification accuracy, graph-based semi-supervised learning leverages the ample unlabeled nodes to train together with the scarce…

Machine Learning · Computer Science 2023-03-14 Jiaren Xiao , Quanyu Dai , Xiaochen Xie , James Lam , Ka-Wai Kwok

Graph neural networks (GNNs) on text--attributed graphs (TAGs) typically encode node texts using pretrained language models (PLMs) and propagate these embeddings through linear neighborhood aggregation. However, the representation spaces of…

Node classification in attributed graphs is an important task in multiple practical settings, but it can often be difficult or expensive to obtain labels. Active learning can improve the achieved classification performance for a given…

Machine Learning · Computer Science 2020-07-13 Florence Regol , Soumyasundar Pal , Yingxue Zhang , Mark Coates

Graph representation learning methods have been widely adopted in financial applications to enhance company representations by leveraging inter-firm relationships. However, current approaches face three key challenges: (1) The advantages of…

Statistical Finance · Quantitative Finance 2025-07-04 Yingjie Niu , Mingchuan Zhao , Valerio Poti , Ruihai Dong

In community-based question answering (CQA) platforms, automatic answer ranking for a given question is critical for finding potentially popular answers in early times. The mainstream approaches learn to generate answer ranking scores based…

Computation and Language · Computer Science 2021-03-23 Wei Zhang , Zeyuan Chen , Chao Dong , Wen Wang , Hongyuan Zha , Jianyong Wang

Graph classification is an important learning task for graph-structured data. Graph neural networks (GNNs) have recently gained growing attention in graph learning and have shown significant improvements in many important graph problems.…

Machine Learning · Computer Science 2024-01-31 Tao Wen , Elynn Chen , Yuzhou Chen

Spatial multi-modal omics technology, highlighted by Nature Methods as an advanced biological technique in 2023, plays a critical role in resolving biological regulatory processes with spatial context. Recently, graph neural networks based…

Genomics · Quantitative Biology 2024-12-19 Xinlei Huang , Zhiqi Ma , Dian Meng , Yanran Liu , Shiwei Ruan , Qingqiang Sun , Xubin Zheng , Ziyue Qiao

Graph Attention Networks (GATs) are the state-of-the-art neural architecture for representation learning with graphs. GATs learn attention functions that assign weights to nodes so that different nodes have different influences in the…

Machine Learning · Computer Science 2019-10-29 Guangtao Wang , Rex Ying , Jing Huang , Jure Leskovec

Effective and efficient graph representation learning is essential for enabling critical downstream tasks, such as node classification, link prediction, and subgraph search. However, existing graph neural network (GNN) architectures often…

Machine Learning · Computer Science 2025-09-24 Sixuan Wang , Jiao Yin , Jinli Cao , MingJian Tang , Hua Wang , Yanchun Zhang