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Related papers: UTSA-NLP at ArchEHR-QA 2025: Improving EHR Questio…

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Automated question answering (QA) over electronic health records (EHRs) can bridge critical information gaps for clinicians and patients, yet it demands both precise evidence retrieval and faithful answer generation under limited…

Automated question answering (QA) over electronic health records (EHRs) demands precise evidence retrieval, faithful answer generation, and explicit grounding of answers in clinical notes. In this work, we present Neural1.5, our method for…

Computation and Language · Computer Science 2026-05-12 Abrar Majeedi , Viswanatha Reddy Gajjala , Sai Prasanna Teja Reddy Bogireddy , Siddhant Rai

Patients have distinct information needs about their hospitalization that can be addressed using clinical evidence from electronic health records (EHRs). While artificial intelligence (AI) systems show promise in meeting these needs, robust…

Computation and Language · Computer Science 2026-03-31 Sarvesh Soni , Dina Demner-Fushman

Patient portals now give individuals direct access to their electronic health records (EHRs), yet access alone does not ensure patients understand or act on the complex clinical information contained in these records. The ArchEHR-QA 2026…

Computation and Language · Computer Science 2026-04-30 Md Biplob Hosen , Md Alomgeer Hussein , Md Akmol Masud , Omar Faruque , Tera L Reynolds , Lujie Karen Chen

This work presents three different approaches to address the ArchEHR-QA 2025 Shared Task on automated patient question answering. We introduce an end-to-end prompt-based baseline and two two-step methods to divide the task, without…

We describe the Yale-DM-Lab system for the ArchEHR-QA 2026 shared task. The task studies patient-authored questions about hospitalization records and contains four subtasks (ST): clinician-interpreted question reformulation, evidence…

Computation and Language · Computer Science 2026-04-09 Elyas Irankhah , Samah Fodeh

We present a unified system addressing both Subtask 3 (answer generation) and Subtask 4 (evidence sentence alignment) of the ArchEHR-QA Shared Task. For Subtask 3, we apply two-stage Quantised Low-Rank Adaptation (QLoRA) to Qwen3-4B loaded…

Computation and Language · Computer Science 2026-04-17 Mohammad AL-Smadi

Healthcare systems continuously generate vast amounts of electronic health records (EHRs), commonly stored in the Fast Healthcare Interoperability Resources (FHIR) standard. Despite the wealth of information in these records, their…

Computation and Language · Computer Science 2025-01-24 Sara Kothari , Ayush Gupta

Electronic health records (EHRs) hold significant value for research and applications. As a new way of information extraction, question answering (QA) can extract more flexible information than conventional methods and is more accessible to…

Computation and Language · Computer Science 2024-02-20 Huaiyuan Ying , Sheng Yu

The extraction of critical patient information from Electronic Health Records (EHRs) poses significant challenges due to the complexity and unstructured nature of the data. Traditional machine learning approaches often fail to capture…

Computation and Language · Computer Science 2025-09-03 Zhimeng Luo , Abhibha Gupta , Adam Frisch , Daqing He

In the expanding field of language model applications, medical knowledge representation remains a significant challenge due to the specialized nature of the domain. Large language models, such as GPT-4, obtain reasonable scores on medical…

Computation and Language · Computer Science 2024-05-24 Julien Khlaut , Corentin Dancette , Elodie Ferreres , Alaedine Bennani , Paul Hérent , Pierre Manceron

Clinical question answering over electronic health records (EHRs) can help clinicians and patients access relevant medical information more efficiently. However, many recent approaches rely on large cloud-based models, which are difficult…

Computation and Language · Computer Science 2026-03-31 Ibrahim Ebrar Yurt , Fabian Karl , Tejaswi Choppa , Florian Matthes

Clinical Question Answering (QA) systems enable doctors to quickly access patient information from electronic health records (EHRs). However, training these systems requires significant annotated data, which is limited due to the expertise…

Computation and Language · Computer Science 2024-12-09 Fan Bai , Keith Harrigian , Joel Stremmel , Hamid Hassanzadeh , Ardavan Saeedi , Mark Dredze

Large Language Models (LLMs) have demonstrated substantial progress in biomedical and clinical applications, motivating rigorous evaluation of their ability to answer nuanced, evidence-based questions. We curate a multi-source benchmark…

Computation and Language · Computer Science 2025-09-16 Can Wang , Yiqun Chen

Background: Formulation, associated with suicide risk assessment, is an individualised process that seeks to understand the idiosyncratic nature and development of an individual's problems. Auditing clinical documentation on an electronic…

Computation and Language · Computer Science 2024-12-23 Rajib Rana , Niall Higgins , Kazi N. Haque , John Reilly , Kylie Burke , Kathryn Turner , Anthony R. Pisani , Terry Stedman

Biomedical text mining and question-answering are essential yet highly demanding tasks, particularly in the face of the exponential growth of biomedical literature. In this work, we present our participation in the 13th edition of the…

Computation and Language · Computer Science 2025-08-05 Dimitra Panou , Alexandros C. Dimopoulos , Manolis Koubarakis , Martin Reczko

Text-to-SQL models are pivotal for making Electronic Health Records (EHRs) accessible to healthcare professionals without SQL knowledge. With the advancements in large language models, these systems have become more adept at translating…

Computation and Language · Computer Science 2024-05-21 Yongrae Jo , Seongyun Lee , Minju Seo , Sung Ju Hwang , Moontae Lee

We propose a novel methodology to generate domain-specific large-scale question answering (QA) datasets by re-purposing existing annotations for other NLP tasks. We demonstrate an instance of this methodology in generating a large-scale QA…

Computation and Language · Computer Science 2018-09-05 Anusri Pampari , Preethi Raghavan , Jennifer Liang , Jian Peng

Community-based Question Answering (CQA) sites play an important role in addressing health information needs. However, a significant number of posted questions remain unanswered. Automatically answering the posted questions can provide a…

Machine Learning · Statistics 2016-07-05 Papis Wongchaisuwat , Diego Klabjan , Siddhartha R. Jonnalagadda

Electronic health records (EHRs) are long, noisy, and often redundant, posing a major challenge for the clinicians who must navigate them. Large language models (LLMs) offer a promising solution for extracting and reasoning over this…

Computation and Language · Computer Science 2025-08-21 Skatje Myers , Dmitriy Dligach , Timothy A. Miller , Samantha Barr , Yanjun Gao , Matthew Churpek , Anoop Mayampurath , Majid Afshar
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