Related papers: On Minimizers of Minimum Density
We show that several versions of Floyd and Rivest's algorithm Select for finding the $k$th smallest of $n$ elements require at most $n+\min\{k,n-k\}+o(n)$ comparisons on average and with high probability. This rectifies the analysis of…
We study learning algorithms that are restricted to using a small amount of information from their input sample. We introduce a category of learning algorithms we term $d$-bit information learners, which are algorithms whose output conveys…
Given strings $P$ and $Q$ the (exact) string matching problem is to find all positions of substrings in $Q$ matching $P$. The classical Knuth-Morris-Pratt algorithm [SIAM J. Comput., 1977] solves the string matching problem in linear time…
In many applications including integer-forcing linear multiple-input and multiple-output (MIMO) receiver design, one needs to solve a successive minima problem (SMP) on an $n$-dimensional lattice to get an optimal integer coefficient matrix…
Kernel $k$-means clustering is a powerful tool for unsupervised learning of non-linearly separable data. Since the earliest attempts, researchers have noted that such algorithms often become trapped by local minima arising from…
The minimum unsatisfiability version of a constraint satisfaction problem (MinCSP) asks for an assignment where the number of unsatisfied constraints is minimum possible, or equivalently, asks for a minimum-size set of constraints whose…
We consider an optimal control problem describing a laser-induced population transfer on a $n$-level quantum system. For a convex cost depending only on the moduli of controls (i.e. the lasers intensities), we prove that there always exists…
The scheme of the sliding window is known in Information Theory, Computer Science, the problem of predicting and in stastistics. Let a source with unknown statistics generate some word $... x_{-1}x_{0}x_{1}x_{2}...$ in some alphabet $A$.…
The formal version of our work has been published in BMC Bioinformatics and can be found here: http://www.biomedcentral.com/1471-2105/13/S6/S1 Motivation: To tackle the problem of huge memory usage associated with de Bruijn graph-based…
The $k$-means is a popular clustering objective, although it is inherently non-robust and sensitive to outliers. Its popular seeding or initialization called $k$-means++ uses $D^{2}$ sampling and comes with a provable $O(\log k)$…
In the average-case $k$-SUM problem, given $r$ integers chosen uniformly at random from $\{0,\dots,M-1\}$, the objective is to find a ``solution'' set of $k$ numbers that sum to $0$ modulo $M$. In the dense regime of $M \leq r^k$, where…
This paper presents a general coding method where data in a Hilbert space are represented by finite dimensional coding vectors. The method is based on empirical risk minimization within a certain class of linear operators, which map the set…
Many commonly studied species now have more than one chromosome-scale genome assembly, revealing a large amount of genetic diversity previously missed by approaches that map short reads to a single reference. However, many species still…
Wheeler DFAs (WDFAs) are a sub-class of finite-state automata which is playing an important role in the emerging field of compressed data structures: as opposed to general automata, WDFAs can be stored in just $\log\sigma + O(1)$ bits per…
We propose a simple yet effective multiple kernel clustering algorithm, termed simple multiple kernel k-means (SimpleMKKM). It extends the widely used supervised kernel alignment criterion to multi-kernel clustering. Our criterion is given…
Minwise hashing (MinHash) is an important and practical algorithm for generating random hashes to approximate the Jaccard (resemblance) similarity in massive binary (0/1) data. The basic theory of MinHash requires applying hundreds or even…
We consider the one-bit quantizer that minimizes the mean squared error for a source living in a real Hilbert space. The optimal quantizer is a projection followed by a thresholding operation, and we provide methods for identifying the…
A $k$-submodular function is a generalization of submodular and bisubmodular functions. This paper establishes a compact representation for minimizers of a $k$-submodular function by a poset with inconsistent pairs (PIP). This is a…
We consider the problem of minimizing an objective function that is the sum of a convex function and a group sparsity-inducing regularizer. Problems that integrate such regularizers arise in modern machine learning applications, often for…
In this paper we define a new problem, motivated by computational biology, $LCSk$ aiming at finding the maximal number of $k$ length $substrings$, matching in both input strings while preserving their order of appearance. The traditional…