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This paper introduces the shapr R package, a versatile tool for generating Shapley value-based prediction explanations for machine learning and statistical regression models. Moreover, the shaprpy Python library brings the core capabilities…

Machine Learning · Computer Science 2026-02-03 Martin Jullum , Lars Henry Berge Olsen , Jon Lachmann , Annabelle Redelmeier

While the recursive property of entropy is well known in information theory, it is rarely utilized in thermodynamics, despite entropy originating in this field. Moreover, computational tools to implement this concept within first-principles…

Materials Science · Physics 2026-04-21 Nigel Lee En Hew , Luke Allen Myers , Shun-Li Shang , Zi-Kui Liu

With the prevalence of sensor failures, imputation, the process of estimating missing values, has emerged as the cornerstone of time series data pre-processing. While numerous imputation algorithms have been developed to repair these data…

Machine Learning · Computer Science 2026-01-23 Quentin Nater , Mourad Khayati

Python's dynamic type system, while offering significant flexibility and expressiveness, poses substantial challenges for static analysis and automated tooling, particularly in unannotated or partially annotated codebases. Existing type…

Software Engineering · Computer Science 2026-04-08 Ali Aman , Muhammad Asaduzzaman , Shaowei Wang

Large language models (LLMs) have revolutionized the field of AI, demonstrating unprecedented capacity across various tasks. However, the inference process for LLMs comes with significant computational costs. In this paper, we propose an…

Computation and Language · Computer Science 2023-05-30 Zangwei Zheng , Xiaozhe Ren , Fuzhao Xue , Yang Luo , Xin Jiang , Yang You

We present a Python package for ground-state preparation based on the probabilistic imaginary-time evolution algorithm, with particular focus on its state-vector-based implementation. A standard shot-based simulation is also supported, and…

Quantum Physics · Physics 2026-05-19 Pascal Sievers , Satoshi Ejima

The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory. IDTxl provides functionality to…

pm4py is a process mining library for Python implementing several process mining (PM) artifacts and algorithms. It also offers methods to integrate PM with large language models (LLMs). This paper examines how the current paradigms of PM on…

Databases · Computer Science 2024-04-10 Alessandro Berti

With the advent of large language models (LLMs) like GPT-3, a natural question is the extent to which these models can be utilized for source code optimization. This paper presents methodologically stringent case studies applied to…

Software Engineering · Computer Science 2024-03-01 Andreas Florath

Current large language model (LLM) serving systems, primarily designed for text completion, are neither efficient nor adaptable for increasingly complex LLM applications due to their inflexible design. We propose a new LLM serving system…

Computation and Language · Computer Science 2025-10-30 In Gim , Lin Zhong

The INLA package provides a tool for computationally efficient Bayesian modeling and inference for various widely used models, more formally the class of latent Gaussian models. It is a non-sampling based framework which provides…

Methodology · Statistics 2019-07-26 Janet van Niekerk , Haakon Bakka , Haavard Rue , Olaf Schenk

Almost all applications stop scaling at some point; those that don't are seldom performant when considering time to solution on anything but aspirational/unicorn resources. Recognizing these tradeoffs as well as greater user functionality…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-28 Stephen Hudson , Jeffrey Larson , John-Luke Navarro , Stefan M. Wild

As modern scientific simulations grow ever more in size and complexity, even their analysis and post-processing becomes increasingly demanding, calling for the use of HPC resources and methods. yt is a parallel, open source post-processing…

Instrumentation and Methods for Astrophysics · Physics 2019-10-18 Salvatore Cielo , Luigi Iapichino , Fabio Baruffa

PaPy, which stands for parallel pipelines in Python, is a highly flexible framework that enables the construction of robust, scalable workflows for either generating or processing voluminous datasets. A workflow is created from user-written…

Programming Languages · Computer Science 2014-07-17 Marcin Cieslik , Cameron Mura

Flaky tests obstruct software development, and studying and proposing mitigations against them has therefore become an important focus of software engineering research. To conduct sound investigations on test flakiness, it is crucial to…

Software Engineering · Computer Science 2023-05-09 Martin Gruber , Gordon Fraser

Motivated by the construction of the It\^o stochastic integral, we consider a step function method to discretize and simulate volatility modulated L\'evy semistationary processes. Moreover, we assess the accuracy of the method with a…

Applications · Statistics 2014-07-11 Mikkel Bennedsen , Asger Lunde , Mikko S. Pakkanen

We present IntelliProof, an interactive system for analyzing argumentative essays through LLMs. IntelliProof structures an essay as an argumentation graph, where claims are represented as nodes, supporting evidence is attached as node…

Computation and Language · Computer Science 2025-11-19 Kaveh Eskandari Miandoab , Katharine Kowalyshyn , Kabir Pamnani , Anesu Gavhera , Vasanth Sarathy , Matthias Scheutz

TextDescriptives is a Python package for calculating a large variety of metrics from text. It is built on top of spaCy and can be easily integrated into existing workflows. The package has already been used for analysing the linguistic…

Computation and Language · Computer Science 2023-10-30 Lasse Hansen , Ludvig Renbo Olsen , Kenneth Enevoldsen

As the use of text-to-image generative models increases, so does the adoption of automatic benchmarking methods used in their evaluation. However, while metrics and datasets abound, there are few unified benchmarking libraries that provide…

CVXPY is a domain-specific language for convex optimization embedded in Python. It allows the user to express convex optimization problems in a natural syntax that follows the math, rather than in the restrictive standard form required by…

Optimization and Control · Mathematics 2016-06-02 Steven Diamond , Stephen Boyd
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