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Functional ultrasound (fUS) indirectly measures brain activity by recording changes in cerebral blood volume and flow in response to neural activation. Conventional approaches model such functional neuroimaging data as the convolution…

Signal Processing · Electrical Eng. & Systems 2022-05-26 Aybuke Erol , Chagajeg Soloukey , Bastian Generowicz , Nikki Van Dorp , Sebastiaan Koekkoek , Pieter Kruizinga , Borbala Hunyadi

Recent developments in fluorescence microscopy allow capturing high-resolution 3D images over time for living model organisms. To be able to image even large specimens, techniques like multi-view light-sheet imaging record different…

Image and Video Processing · Electrical Eng. & Systems 2021-08-29 Canyu Yang , Dennis Eschweiler , Johannes Stegmaier

In the analysis of High-Energy Physics data, it is frequently desired to separate resonant signals from a smooth, non-resonant background. This paper introduces a new technique - functional decomposition (FD) - to accomplish this task. It…

Data Analysis, Statistics and Probability · Physics 2018-05-15 Ryan Edgar , Dante Amidei , Christopher Grud , Karishma Sekhon

To obtain the initial pressure from the collected data on a planar sensor arrangement in photoacoustic tomography, there exists an exact analytic frequency domain reconstruction formula. An efficient realization of this formula needs to…

The process of removing occluding hair has a relevant role in the early and accurate diagnosis of skin cancer. It consists of detecting hairs and restore the texture below them, which is sporadically occluded. In this work, we present a…

Computer Vision and Pattern Recognition · Computer Science 2020-10-13 Lidia Talavera-Martínez , Pedro Bibiloni , Manuel González-Hidalgo

Magnetic Particle Imaging (MPI) is an emerging imaging modality that maps the spatial distribution of magnetic nanoparticles. The x-space reconstruction in MPI results in highly blurry images, where the resolution depends on both system…

Medical Physics · Physics 2020-01-31 Onur Yorulmaz , Omer Burak Demirel , Yavuz Muslu , Tolga Çukur , Emine U Saritas , A Enis Çetin

Genomic data are subject to various sources of confounding, such as demographic variables, biological heterogeneity, and batch effects. To identify genomic features associated with a variable of interest in the presence of confounders, the…

Methodology · Statistics 2025-12-08 Asmita Roy , Jun Chen , Xianyang Zhang

Non-negative matrix factorization (NMF) is widely used in many applications for dimensionality reduction. Inferring an appropriate number of factors for NMF is a challenging problem, and several approaches based on information criteria or…

Methodology · Statistics 2025-02-18 Alessandro Zito , Jeffrey W. Miller

The decomposition of a signal is a fundamental tool in many fields of research, including signal processing, geophysics, astrophysics, engineering, medicine, and many more. By breaking down complex signals into simpler oscillatory…

Numerical Analysis · Mathematics 2024-12-03 Roberto Cavassi , Antonio Cicone , Enza Pellegrino , Haomin Zhou

Edema is a potential indicator of underlying pathological changes. However, its low-contrast signature is often masked in conventional B-mode imaging by strong scatterers, making reliable detection challenging. Ultrasound (US) provides a…

Signal Processing · Electrical Eng. & Systems 2026-03-09 Ruizhi Zhang , Yhonatan Kvich , Rui Guo , Oded Cohen , Yonina C. Eldar

The famous Fourier theorem states that, under some restrictions, any periodic function (or real world signal) can be obtained as a sum of sinusoids, and hence, a technique exists for decomposing a signal into its sinusoidal components. From…

Numerical Analysis · Computer Science 2008-04-24 Sossio Vergara

In image deconvolution problems, the diagonalization of the underlying operators by means of the FFT usually yields very large speedups. When there are incomplete observations (e.g., in the case of unknown boundaries), standard…

Computer Vision and Pattern Recognition · Computer Science 2016-08-31 Miguel Simões , Luis B. Almeida , José Bioucas-Dias , Jocelyn Chanussot

This paper addresses the problem of expressing a signal as a sum of frequency components (sinusoids) wherein each sinusoid may exhibit abrupt changes in its amplitude and/or phase. The Fourier transform of a narrow-band signal, with a…

Machine Learning · Computer Science 2013-02-27 Yin Ding , Ivan W. Selesnick

Density estimation is a fundamental problem that arises in many areas of astronomy, with applications ranging from selecting quasars using color distributions to characterizing stellar abundances. Astronomical observations are inevitably…

Instrumentation and Methods for Astrophysics · Physics 2024-12-05 Yi Kang , Joseph F. Hennawi , Jan-Torge Schindler , John Tamanas , Riccardo Nanni

Microscopy is one of the most essential imaging techniques in life sciences. High-quality images are required in order to solve (potentially life-saving) biomedical research problems. Many microscopy techniques do not achieve sufficient…

Computer Vision and Pattern Recognition · Computer Science 2018-10-24 Joris Roels , Jan Aelterman , Jonas De Vylder , Hiep Luong , Yvan Saeys , Wilfried Philips

Dye experimentation is a widely used method in experimental fluid mechanics for flow analysis or for the study of the transport of particles within a fluid. This technique is particularly useful in biomedical diagnostic applications ranging…

Fluid Dynamics · Physics 2023-09-25 Faisal Amlani , Heng Wei , Niema M. Pahlevan

This letter presents a novel hybrid method that leverages deep learning to exploit the multi-resolution analysis capability of the wavelets, in order to denoise a photoplethysmography (PPG) signal. Under the proposed method, a noisy PPG…

Information Theory · Computer Science 2023-01-18 Rabia Ahmed , Ahsan Mehmood , Muhammad Mahboob Ur Rahman , Octavia A. Dobre

Purpose: To develop an algorithm for robust partial Fourier (PF) reconstruction applicable to diffusion-weighted (DW) images with non-smooth phase variations. Methods: Based on an unrolled proximal splitting algorithm, a neural network…

Image and Video Processing · Electrical Eng. & Systems 2022-01-11 Fasil Gadjimuradov , Thomas Benkert , Marcel Dominik Nickel , Andreas Maier

A non iterative direct blind deconvolution procedure, previously used successfully to sharpen Hubble Space Telescope imagery, is now found useful in sharpening nanoscale scanning electron microscope (SEM) and helium ion microscope (HIM)…

Instrumentation and Detectors · Physics 2025-02-28 Alfred S. Carasso , Andras E. Vladar

We introduce a nonparametric spectral density estimator for continuous-time and continuous-space processes measured at fully irregular locations. Our estimator is constructed using a weighted nonuniform Fourier sum whose weights yield a…

Methodology · Statistics 2025-10-07 Christopher J. Geoga , Paul G. Beckman