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Bioinformatics web servers are critical resources in modern biomedical research, facilitating interactive exploration of datasets through custom-built interfaces with rich visualization capabilities. However, this human-centric design…

Other Quantitative Biology · Quantitative Biology 2026-02-25 Matthias Flotho , Ian Ferenc Diks , Philipp Flotho , Leidy-Alejandra G. Molano , Pascal Hirsch , Andreas Keller

We present a design and an implementation of a security policy specification language based on metric linear-time temporal logic (MTL). MTL features temporal operators that are indexed by time intervals, allowing one to specify…

Logic in Computer Science · Computer Science 2013-11-12 Hendra Gunadi , Alwen Tiu

Machine learning (ML) is crucial in network anomaly detection for proactive threat hunting, reducing detection and response times significantly. However, challenges in model training, maintenance, and frequent false positives impact its…

Cryptography and Security · Computer Science 2023-09-29 Tarek Ali , Panos Kostakos

Threat detection systems rely on rule-based logic to identify adversarial behaviors, yet the conformance of these rules to high-level threat models is rarely verified formally. We present a formal verification framework that models both…

Cryptography and Security · Computer Science 2025-09-17 Dumitru-Bogdan Prelipcean , Cătălin Dima

The integration of artificial intelligence into automated penetration testing (AutoPT) has highlighted the necessity of simulation modeling for the training of intelligent agents, due to its cost-efficiency and swift feedback capabilities.…

Artificial Intelligence · Computer Science 2025-02-18 Yunfei Wang , Shixuan Liu , Wenhao Wang , Changling Zhou , Chao Zhang , Jiandong Jin , Cheng Zhu

The variety of data in data lakes presents significant challenges for data analytics, as data scientists must simultaneously analyze multi-modal data, including structured, semi-structured, and unstructured data. While Large Language Models…

Databases · Computer Science 2025-05-19 Chao Zhang , Shaolei Zhang , Quehuan Liu , Sibei Chen , Tong Li , Ju Fan

Typosquatting is a long-standing cyber threat that exploits human error in typing URLs to deceive users, distribute malware, and conduct phishing attacks. With the proliferation of domain names and new Top-Level Domains (TLDs),…

Cryptography and Security · Computer Science 2025-03-31 Jackson Welch

Human spatiotemporal behavior simulation is critical for urban planning research, yet traditional rule-based and statistical approaches suffer from high computational costs, limited generalizability, and poor scalability. While large…

Artificial Intelligence · Computer Science 2025-06-13 Yu Zhang , Yang Hu , De Wang

Safety limitations in service robotics across various industries have raised significant concerns about the need for robust mechanisms ensuring that robots adhere to safe practices, thereby preventing actions that might harm humans or cause…

Robotics · Computer Science 2025-11-27 Yong Qi , Gabriel Kyebambo , Siyuan Xie , Wei Shen , Shenghui Wang , Bitao Xie , Bin He , Zhipeng Wang , Shuo Jiang

AI development environments are evolving into observability first platforms that integrate real time telemetry, prompt traces, and evaluation feedback into the developer workflow. This paper introduces telemetry aware integrated development…

Software Engineering · Computer Science 2025-06-16 Vincent Koc , Jacques Verre , Douglas Blank , Abigail Morgan

Recent advances in LLM Multi-Agent Systems enable scalable orchestration of sub-agents, each coordinating hundreds or thousands of tools or Model Context Protocol (MCP) servers. However, existing retrieval methods typically match queries…

Computation and Language · Computer Science 2025-11-05 Elias Lumer , Faheem Nizar , Anmol Gulati , Pradeep Honaganahalli Basavaraju , Vamse Kumar Subbiah

System Instructions in Large Language Models (LLMs) are commonly used to enforce safety policies, define agent behavior, and protect sensitive operational context in agentic AI applications. These instructions may contain sensitive…

Cryptography and Security · Computer Science 2026-04-02 Anubhab Sahu , Diptisha Samanta , Reza Soosahabi

The growth of online platforms and user content requires strong content moderation systems that can handle complex inputs from various media types. While large language models (LLMs) are effective, their high computational cost and latency…

Computation and Language · Computer Science 2026-04-09 Shutong Zhang , Dylan Zhou , Yinxiao Liu , Yang Yang , Huiwen Luo , Wenfei Zou

Current Multimodal Large Language Models (MLLMs) rely on centralized architectures and often suffer from poor alignment between the input task and their fixed visual encoding modules, which limits performance on diverse and dynamic visual…

Networking and Internet Architecture · Computer Science 2025-08-05 Yongjie Zeng , Hongyang Du

Large Language Model (LLM) agents are autonomous systems powered by LLMs, capable of reasoning and planning to solve problems by leveraging a set of tools. However, the integration of multi-tool capabilities in LLM agents introduces…

Cryptography and Security · Computer Science 2025-12-04 Zichuan Li , Jian Cui , Xiaojing Liao , Luyi Xing

With the proliferation of edge devices, there is a significant increase in attack surface on these devices. The decentralized deployment of threat intelligence on edge devices, coupled with adaptive machine learning techniques such as the…

Cryptography and Security · Computer Science 2024-10-10 Syed Mhamudul Hasan , Alaa M. Alotaibi , Sajedul Talukder , Abdur R. Shahid

Augmenting large language models (LLMs) with external tools has emerged as a promising approach to solving complex problems. However, traditional methods, which finetune LLMs with tool demonstration data, can be both costly and restricted…

Computation and Language · Computer Science 2024-01-17 Shibo Hao , Tianyang Liu , Zhen Wang , Zhiting Hu

Improving and understanding the training dynamics and reasoning of Large Language Models (LLMs) has become essential for their deployment in AI-based security tools, such as software vulnerability detection. In this work, we present an…

Cryptography and Security · Computer Science 2025-07-08 Marco Simoni , Aleksandar Fontana , Giulio Rossolini , Andrea Saracino

This paper presents MCP4EDA, the first Model Context Protocol server that enables Large Language Models (LLMs) to control and optimize the complete open-source RTL-to-GDSII design flow through natural language interaction. The system…

Hardware Architecture · Computer Science 2025-07-29 Yiting Wang , Wanghao Ye , Yexiao He , Yiran Chen , Gang Qu , Ang Li

Enhancing clinical decision support (CDS), reducing documentation burdens, and improving patient health literacy remain persistent challenges in digital health. This paper presents an open-source, agent-based framework that integrates Large…

Software Engineering · Computer Science 2025-06-18 Abul Ehtesham , Aditi Singh , Saket Kumar
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