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Supervised fine-tuning (SFT) is a standard approach for adapting large language models to specialized domains, yet its application to protein sequence modeling and protein language models (PLMs) remains ad hoc. This is in part because…

Machine Learning · Computer Science 2025-12-11 Amin Tavakoli , Raswanth Murugan , Ozan Gokdemir , Arvind Ramanathan , Frances Arnold , Anima Anandkumar

Large language models (LLMs) have been widely used for problem-solving tasks. Most recent work improves their performance through supervised fine-tuning (SFT) with labeled data or reinforcement learning (RL) from task feedback. In this…

Computation and Language · Computer Science 2025-09-29 Hang Li , Kaiqi Yang , Yucheng Chu , Hui Liu , Jiliang Tang

Instruction tuning is crucial for enabling Large Language Models (LLMs) to solve real-world tasks. Prior work has shown the effectiveness of instruction-tuning data synthesized solely from LLMs, raising a fundamental question: Do we still…

Supervised fine-tuning (SFT) is a common method to enhance the tool calling capabilities of Large Language Models (LLMs), with the training data often being synthesized. The current data synthesis process generally involves sampling a set…

Computation and Language · Computer Science 2025-03-18 Zezhong Wang , Xingshan Zeng , Weiwen Liu , Liangyou Li , Yasheng Wang , Lifeng Shang , Xin Jiang , Qun Liu , Kam-Fai Wong

Large language models (LLMs) are commonly trained on datasets consisting of fixed-length token sequences. These datasets are created by randomly concatenating documents of various lengths and then chunking them into sequences of a…

Computation and Language · Computer Science 2025-01-08 Hadi Pouransari , Chun-Liang Li , Jen-Hao Rick Chang , Pavan Kumar Anasosalu Vasu , Cem Koc , Vaishaal Shankar , Oncel Tuzel

Recent studies show that in supervised fine-tuning (SFT) of large language models (LLMs), data quality matters more than quantity. While most data cleaning methods concentrate on filtering entire samples, the quality of individual tokens…

Computation and Language · Computer Science 2026-03-12 Jinlong Pang , Na Di , Zhaowei Zhu , Jiaheng Wei , Hao Cheng , Chen Qian , Yang Liu

Large language models (LLMs) achieve remarkable advancements by leveraging tools to interact with environments, a critical step toward generalized AI. However, the standard supervised fine-tuning (SFT) approach, which relies on large-scale…

Computation and Language · Computer Science 2025-08-27 Junjie Ye , Yilong Wu , Sixian Li , Yuming Yang , Zhiheng Xi , Tao Gui , Qi Zhang , Xuanjing Huang , Peng Wang , Zhongchao Shi , Jianping Fan , Zhengyin Du

Supervised Fine-Tuning (SFT) Large Language Models (LLM) fundamentally rely on high-quality training data. While data selection and data synthesis are two common strategies to improve data quality, existing approaches often face limitations…

Computation and Language · Computer Science 2025-10-23 Zinan Tang , Xin Gao , Qizhi Pei , Zhuoshi Pan , Mengzhang Cai , Jiang Wu , Conghui He , Lijun Wu

Alignment, endowing a pre-trained Large language model (LLM) with the ability to follow instructions, is crucial for its real-world applications. Conventional supervised fine-tuning (SFT) methods formalize it as causal language modeling…

Computation and Language · Computer Science 2024-12-18 Yuchen Fan , Yuzhong Hong , Qiushi Wang , Junwei Bao , Hongfei Jiang , Yang Song

Large Language Models (LLMs), when used in educational settings without pedagogical fine-tuning, often provide immediate answers rather than guiding students through the problem-solving process. This approach falls short of pedagogically…

Computation and Language · Computer Science 2024-10-08 Shashank Sonkar , Kangqi Ni , Sapana Chaudhary , Richard G. Baraniuk

In this work, we develop a specialized dataset aimed at enhancing the evaluation and fine-tuning of large language models (LLMs) specifically for wireless communication applications. The dataset includes a diverse set of multi-hop…

Machine Learning · Computer Science 2025-01-17 Yushen Lin , Ruichen Zhang , Wenqi Huang , Kaidi Wang , Zhiguo Ding , Daniel K. C. So , Dusit Niyato

Recent work suggests that preference-tuning techniques -- such as Reinforcement Learning from Human Feedback (RLHF) methods like PPO and GRPO, as well as alternatives like DPO -- reduce diversity, creating a dilemma given that these models…

Computation and Language · Computer Science 2026-02-27 Alexander Shypula , Shuo Li , Botong Zhang , Vishakh Padmakumar , Kayo Yin , Osbert Bastani

Anomaly detection in computational workflows is critical for ensuring system reliability and security. However, traditional rule-based methods struggle to detect novel anomalies. This paper leverages large language models (LLMs) for…

Software Engineering · Computer Science 2024-07-26 Hongwei Jin , George Papadimitriou , Krishnan Raghavan , Pawel Zuk , Prasanna Balaprakash , Cong Wang , Anirban Mandal , Ewa Deelman

While Large Language Models (LLMs) have made significant strides in replicating human-like abilities, there are concerns about a reduction in the linguistic diversity of their outputs. This results in the homogenization of viewpoints and…

Computation and Language · Computer Science 2024-12-05 Long Mai , Julie Carson-Berndsen

The rise of large language models (LLMs) has created a significant disparity: industrial research labs with their computational resources, expert teams, and advanced infrastructures, can effectively fine-tune LLMs, while individual…

A common challenge towards the adaptability of Large Language Models (LLMs) is their ability to learn new languages over time without hampering the model's performance on languages in which the model is already proficient (usually English).…

Computation and Language · Computer Science 2026-04-24 Divyanshu Aggarwal , Sankarshan Damle , Navin Goyal , Satya Lokam , Sunayana Sitaram

Data selection for finetuning Large Language Models (LLMs) can be framed as a budget-constrained optimization problem: maximizing a model's downstream performance under a strict training data budget. Solving this problem is generally…

Machine Learning · Computer Science 2025-10-01 Animesh Jha , Harshit Gupta , Ananjan Nandi

Frontier Large language models (LLMs) like ChatGPT and Gemini can decipher cryptic compiler errors for novice programmers, but their computational scale, cost, and tendency to over-assist make them problematic for widespread pedagogical…

Computers and Society · Computer Science 2025-07-09 Lorenzo Lee Solano , Charles Koutcheme , Juho Leinonen , Alexandra Vassar , Jake Renzella

In recent years, Large Language Models (LLMs) have emerged as transformative tools across numerous domains, impacting how professionals approach complex analytical tasks. This systematic mapping study comprehensively examines the…

Computers and Society · Computer Science 2025-08-19 Sai Sanjna Chintakunta , Nathalia Nascimento , Everton Guimaraes

Large language models (LLMs) have achieved remarkable success across various tasks but face deployment challenges due to their massive computational demands. While post-training pruning methods like SparseGPT and Wanda can effectively…

Artificial Intelligence · Computer Science 2026-04-21 Qiao Xiao , Alan Ansell , Boqian Wu , Lu Yin , Mykola Pechenizkiy , Shiwei Liu , Decebal Constantin Mocanu