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When modeling coexpression networks from high-throughput time course data, Pearson Correlation Coefficient (PCC) is one of the most effective and popular similarity functions. However, its reliability is limited since it cannot capture…

Molecular Networks · Quantitative Biology 2014-10-17 Samantha Riccadonna , Giuseppe Jurman , Roberto Visintainer , Michele Filosi , Cesare Furlanello

Fast and scalable alignment of time series is a fundamental challenge in many domains. The standard solution, Dynamic Time Warping (DTW), struggles with poor scalability and sensitivity to noise. We introduce TimePoint, a self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Ron Shapira Weber , Shahar Ben Ishay , Andrey Lavrinenko , Shahaf E. Finder , Oren Freifeld

Distance-based time series anomaly detection methods are prevalent due to their relative non-parametric nature and interpretability. However, the commonly used Euclidean distance is sensitive to noise. While existing works have explored…

Machine Learning · Computer Science 2024-03-05 Hanyang Yuan , Qinglin Cai , Keting Yin

Within many real-world networks the links between pairs of nodes change over time. Thus, there has been a recent boom in studying temporal graphs. Recognizing patterns in temporal graphs requires a proximity measure to compare different…

Machine Learning · Computer Science 2020-07-07 Vincent Froese , Brijnesh Jain , Rolf Niedermeier , Malte Renken

The goal of temporal alignment is to establish time correspondence between two sequences, which has many applications in a variety of areas such as speech processing, bioinformatics, computer vision, and computer graphics. In this paper, we…

Machine Learning · Statistics 2012-06-20 Makoto Yamada , Leonid Sigal , Michalis Raptis , Masashi Sugiyama

The classification of time series data is a well-studied problem with numerous practical applications, such as medical diagnosis and speech recognition. A popular and effective approach is to classify new time series in the same way as…

Machine Learning · Computer Science 2019-01-29 Ricards Marcinkevics , Steven Kelk , Carlo Galuzzi , Berthold Stegemann

Time-series data originate from various applications that describe specific observations or quantities of interest over time. Their analysis often involves the comparison across different time-series data sequences, which in turn requires…

Machine Learning · Computer Science 2024-02-15 Kishansingh Rajput , Duong Binh Nguyen , Guoning Chen

Comparing data defined over space and time is notoriously hard, because it involves quantifying both spatial and temporal variability, while at the same time taking into account the chronological structure of data. Dynamic Time Warping…

Machine Learning · Statistics 2019-11-12 Hicham Janati , Marco Cuturi , Alexandre Gramfort

The paper presents a novel method of finding a fragment in a long temporal sequence similar to the set of shorter sequences. We are the first to propose an algorithm for such a search that does not rely on computing the average sequence…

Data Structures and Algorithms · Computer Science 2024-09-04 Łukasz Borchmann , Dawid Jurkiewicz , Filip Graliński , Tomasz Górecki

Many real-world applications require aligning two temporal sequences, including bioinformatics, handwriting recognition, activity recognition, and human-robot coordination. Dynamic Time Warping (DTW) is a popular alignment method, but can…

Machine Learning · Computer Science 2021-09-21 Sridhar Mahadevan , Anup Rao , Georgios Theocharous , Jennifer Healey

In this paper, for the purpose of data centre energy consumption monitoring and analysis, we propose to detect the running programs in a server by classifying the observed power consumption series. Time series classification problem has…

Neural and Evolutionary Computing · Computer Science 2017-06-08 Yuanlong Li , Han Hu , Yonggang Wen , Jun Zhang

Gromov--Wasserstein (GW) distances compare graphs, shapes, and point clouds through internal distances, without requiring a common coordinate system. This invariance is powerful, but discrete GW is a nonconvex quadratic optimal transport…

Machine Learning · Computer Science 2026-05-15 Ao Xu , Tieru Wu

Time series classification is an important data mining task that has received a lot of interest in the past two decades. Due to the label scarcity in practice, semi-supervised time series classification with only a few labeled samples has…

Machine Learning · Computer Science 2023-09-08 Wenjie Xi , Arnav Jain , Li Zhang , Jessica Lin

Clustering is a fundamental unsupervised learning approach. Many clustering algorithms -- such as $k$-means -- rely on the euclidean distance as a similarity measure, which is often not the most relevant metric for high dimensional data…

Machine Learning · Computer Science 2019-10-22 Aude Genevay , Gabriel Dulac-Arnold , Jean-Philippe Vert

Measuring similarities between unlabeled time series trajectories is an important problem in domains as diverse as medicine, astronomy, finance, and computer vision. It is often unclear what is the appropriate metric to use because of the…

Machine Learning · Computer Science 2018-10-25 Abubakar Abid , James Zou

To effectively search for the optimal motion template in dynamic multidimensional space, this paper proposes a novel optimization algorithm, Dynamic Dimension Wrapping (DDW).The algorithm combines Dynamic Time Warping (DTW) and Euclidean…

Machine Learning · Computer Science 2024-11-18 Dongnan Jin , Yali Liu , Qiuzhi Song , Xunju Ma , Yue Liu , Dehao Wu

Pointwise matches between two time series are of great importance in time series analysis, and dynamic time warping (DTW) is known to provide generally reasonable matches. There are situations where time series alignment should be invariant…

Computer Vision and Pattern Recognition · Computer Science 2015-05-26 Tsu-Wei Chen , Meena Abdelmaseeh , Daniel Stashuk

Learning generic joint representations for video and text by a supervised method requires a prohibitively substantial amount of manually annotated video datasets. As a practical alternative, a large-scale but uncurated and narrated video…

Computer Vision and Pattern Recognition · Computer Science 2022-04-01 Dohwan Ko , Joonmyung Choi , Juyeon Ko , Shinyeong Noh , Kyoung-Woon On , Eun-Sol Kim , Hyunwoo J. Kim

In this paper, we introduce proximal gradient temporal difference learning, which provides a principled way of designing and analyzing true stochastic gradient temporal difference learning algorithms. We show how gradient TD (GTD)…

Machine Learning · Computer Science 2020-06-09 Bo Liu , Ian Gemp , Mohammad Ghavamzadeh , Ji Liu , Sridhar Mahadevan , Marek Petrik

Elastic distances like dynamic time warping (DTW) are central to time series machine learning because they compare sequences under local temporal misalignment. Soft-DTW is an adaptation of DTW that can be used as a gradient-based loss by…

Machine Learning · Computer Science 2026-05-04 Christopher Holder , Anthony Bagnall
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