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Structured state space models (SSMs), the core engine behind prominent neural networks such as S4 and Mamba, are linear dynamical systems adhering to a specified structure, most notably diagonal. In contrast to typical neural network…

Machine Learning · Computer Science 2024-11-01 Yuval Ran-Milo , Eden Lumbroso , Edo Cohen-Karlik , Raja Giryes , Amir Globerson , Nadav Cohen

Structured State Space Models (SSMs) have emerged as alternatives to transformers. While SSMs are often regarded as effective in capturing long-sequence dependencies, we rigorously demonstrate that they are inherently limited by strong…

Machine Learning · Computer Science 2025-03-12 Peihao Wang , Ruisi Cai , Yuehao Wang , Jiajun Zhu , Pragya Srivastava , Zhangyang Wang , Pan Li

Time series modeling is a well-established problem, which often requires that methods (1) expressively represent complicated dependencies, (2) forecast long horizons, and (3) efficiently train over long sequences. State-space models (SSMs)…

Machine Learning · Computer Science 2023-03-17 Michael Zhang , Khaled K. Saab , Michael Poli , Tri Dao , Karan Goel , Christopher Ré

Gaussian-process state-space models (GP-SSMs) provide a flexible nonparametric alternative for modeling time-series dynamics that are nonlinear or difficult to specify parametrically. While the Kalman filter is effective for linear-Gaussian…

Methodology · Statistics 2025-12-02 Genshiro Kitagawa

State-space models (SSMs) are increasingly used in ecology to model time-series such as animal movement paths and population dynamics. This type of hierarchical model is often structured to account for two levels of variability: biological…

Additive smooth models, such as Generalized additive models (GAMs) of location, scale, and shape (GAMLSS), are a popular choice for modeling experimental data. However, software available to fit such models is usually not tailored…

Methodology · Statistics 2025-06-17 Joshua Krause , Jelmer P. Borst , Jacolien van Rij

Long-range dependencies are critical for understanding genomic structure and function, yet most conventional methods struggle with them. Widely adopted transformer-based models, while excelling at short-context tasks, are limited by the…

Emerging applications such as AR are driving demands for machine intelligence capable of processing continuous and/or long-context inputs on local devices. However, currently dominant models based on Transformer architecture suffers from…

Hardware Architecture · Computer Science 2026-03-24 Saptarshi Mitra , Rachid Karami , Haocheng Xu , Sitao Huang , Hyoukjun Kwon

Large Vision-Language Models (LVLMs) have demonstrated remarkable performance across a wide range of multimodal tasks. However, fine-tuning these models for domain-specific applications remains a computationally intensive challenge. This…

Computer Vision and Pattern Recognition · Computer Science 2024-12-16 Chee Ng , Yuen Fung

As astronomical data grows in volume and complexity, the scalability of analysis software becomes increasingly important. At the same time, astrophysics analysis software relies heavily on open-source contributions, so languages and tools…

Instrumentation and Methods for Astrophysics · Physics 2024-02-01 Edward Berman , Jacqueline McCleary

This work establishes a rigorous theoretical foundation for analyzing deep learning systems by leveraging Infinite Time Turing Machines (ITTMs), which extend classical computation into transfinite ordinal steps. Using ITTMs, we reinterpret…

Computational Complexity · Computer Science 2025-06-09 Rukmal Weerawarana , Maxwell Braun

State-space models (SSM) with Markov switching offer a powerful framework for detecting multiple regimes in time series, analyzing mutual dependence and dynamics within regimes, and asserting transitions between regimes. These models…

Methodology · Statistics 2021-06-14 David Degras , Chee-Ming Ting , Hernando Ombao

State-space models (SSMs) offer a promising architecture for sequence modeling, providing an alternative to Transformers by replacing expensive self-attention with linear recurrences. In this paper, we propose a simple yet effective trick…

Machine Learning · Computer Science 2025-05-28 Woomin Song , Jihoon Tack , Sangwoo Mo , Seunghyuk Oh , Jinwoo Shin

Motivation: Estimating model parameters from experimental observations is one of the key challenges in systems biology and can be computationally very expensive. While the Julia programming language was recently developed as a high-level…

Quantitative Methods · Quantitative Biology 2020-11-06 Paul F. Lang , Sungho Shin , Victor M. Zavala

State Space Models (SSMs), developed to tackle long sequence modeling tasks efficiently, offer both parallelizable training and fast inference. At their core are recurrent dynamical systems that maintain a hidden state, with update costs…

Machine Learning · Computer Science 2026-02-26 Makram Chahine , Philipp Nazari , Daniela Rus , T. Konstantin Rusch

Dynamic inference problems in autoregressive (AR/ARMA/ARIMA), exponential smoothing, and navigation are often formulated and solved using state-space models (SSM), which allow a range of statistical distributions to inform innovations and…

Optimization and Control · Mathematics 2019-10-31 Jonathan Jonker , Peng Zheng , Aleksandr Y. Aravkin

Linear State Space Models (SSMs) offer remarkable performance gains in efficient sequence modeling, with constant inference-time computation and memory complexity. Recent advances, such as Mamba, further enhance SSMs with input-dependent…

Machine Learning · Computer Science 2025-06-24 Zheng Zhan , Liliang Ren , Shuohang Wang , Liyuan Liu , Yang Liu , Yeyun Gong , Yanzhi Wang , Yelong Shen

Structured state-space models (SSMs) such as S4, stemming from the seminal work of Gu et al., are gaining popularity as effective approaches for modeling sequential data. Deep SSMs demonstrate outstanding performance across a diverse set of…

Machine Learning · Computer Science 2025-01-07 Nicola Muca Cirone , Antonio Orvieto , Benjamin Walker , Cristopher Salvi , Terry Lyons

Large Audio Language Models (LALM) combine the audio perception models and the Large Language Models (LLM) and show a remarkable ability to reason about the input audio, infer the meaning, and understand the intent. However, these systems…

Audio and Speech Processing · Electrical Eng. & Systems 2024-11-26 Saurabhchand Bhati , Yuan Gong , Leonid Karlinsky , Hilde Kuehne , Rogerio Feris , James Glass

We propose a new class of filtering and smoothing methods for inference in high-dimensional, nonlinear, non-Gaussian, spatio-temporal state-space models. The main idea is to combine the ensemble Kalman filter and smoother, developed in the…

Methodology · Statistics 2019-03-22 Matthias Katzfuss , Jonathan R. Stroud , Christopher K. Wikle