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The vast majority of materials science knowledge exists in unstructured natural language, yet structured data is crucial for innovative and systematic materials design. Traditionally, the field has relied on manual curation and partial…

Text embedding has become a foundational technology in natural language processing (NLP) during the deep learning era, driving advancements across a wide array of downstream tasks. While many natural language understanding challenges can…

Computation and Language · Computer Science 2025-10-22 Zhijie Nie , Zhangchi Feng , Mingxin Li , Cunwang Zhang , Yanzhao Zhang , Dingkun Long , Richong Zhang

Protein language models (pLMs) pre-trained on vast protein sequence databases excel at various downstream tasks but often lack the structural knowledge essential for some biological applications. To address this, we introduce a method to…

Large language models (LLMs) have shown impressive capabilities across a wide range of language tasks. However, their reasoning process is primarily guided by statistical patterns in training data, which limits their ability to handle novel…

Artificial Intelligence · Computer Science 2025-08-21 Hong Su

Large language models (LLMs) are introducing a paradigm shift in molecular discovery by enabling text-guided interaction with chemical spaces through natural language, symbolic notations, with emerging extensions to incorporate multi-modal…

Machine Learning · Computer Science 2025-05-23 Ziqing Wang , Kexin Zhang , Zihan Zhao , Yibo Wen , Abhishek Pandey , Han Liu , Kaize Ding

Fine-tuning of Large Language Models (LLMs) for downstream tasks, performed on domain-specific data has shown significant promise. However, commercial use of such LLMs is limited by the high computational cost required for their deployment…

Computation and Language · Computer Science 2025-03-06 Boris Nazarov , Darya Frolova , Yackov Lubarsky , Alexei Gaissinski , Pavel Kisilev

We introduce a novel evaluation framework for Large Language Models (LLMs) such as \textsc{Llama-2} and \textsc{Mistral}, focusing on importing Precision and Recall metrics from image generation to text generation. This approach allows for…

Computation and Language · Computer Science 2024-06-05 Florian Le Bronnec , Alexandre Verine , Benjamin Negrevergne , Yann Chevaleyre , Alexandre Allauzen

Text preprocessing is a fundamental component of Natural Language Processing, involving techniques such as stopword removal, stemming, and lemmatization to prepare text as input for further processing and analysis. Despite the…

Computation and Language · Computer Science 2025-10-14 Marco Braga , Gian Carlo Milanese , Gabriella Pasi

Large Language Models (LLMs) have achieved remarkable success in various natural language processing tasks, yet their ability to generate long-form content remains poorly understood and evaluated. Our analysis reveals that current LLMs…

Computation and Language · Computer Science 2025-03-10 Siwei Wu , Yizhi Li , Xingwei Qu , Rishi Ravikumar , Yucheng Li , Tyler Loakman , Shanghaoran Quan , Xiaoyong Wei , Riza Batista-Navarro , Chenghua Lin

Humans are accustomed to reading and writing in a forward manner, and this natural bias extends to text understanding in auto-regressive large language models (LLMs). This paper investigates whether LLMs, like humans, struggle with reverse…

Computation and Language · Computer Science 2025-02-25 Sicheng Yu , Yuanchen Xu , Cunxiao Du , Yanying Zhou , Minghui Qiu , Qianru Sun , Hao Zhang , Jiawei Wu

The emergence of large language models (LLMs) has revolutionized machine learning and related fields, showcasing remarkable abilities in comprehending, generating, and manipulating human language. However, their conventional usage through…

Computation and Language · Computer Science 2024-04-18 Andrea Bacciu , Florin Cuconasu , Federico Siciliano , Fabrizio Silvestri , Nicola Tonellotto , Giovanni Trappolini

This paper demonstrates that language models are strong structure-based protein designers. We present LM-Design, a generic approach to reprogramming sequence-based protein language models (pLMs), that have learned massive sequential…

Machine Learning · Computer Science 2023-02-10 Zaixiang Zheng , Yifan Deng , Dongyu Xue , Yi Zhou , Fei YE , Quanquan Gu

The era of Large Language Models (LLMs) raises new demands for automatic evaluation metrics, which should be adaptable to various application scenarios while maintaining low cost and effectiveness. Traditional metrics for automatic text…

Computation and Language · Computer Science 2024-10-29 Shuqian Sheng , Yi Xu , Tianhang Zhang , Zanwei Shen , Luoyi Fu , Jiaxin Ding , Lei Zhou , Xiaoying Gan , Xinbing Wang , Chenghu Zhou

The exponential increase in scientific literature and online information necessitates efficient methods for extracting knowledge from textual data. Natural language processing (NLP) plays a crucial role in addressing this challenge,…

Computation and Language · Computer Science 2025-10-22 Zhyar Rzgar K. Rostam , Gábor Kertész

Large Language Models (LLMs) demonstrate remarkable capabilities in replicating human tasks and boosting productivity. However, their direct application for data extraction presents limitations due to a prioritisation of fluency over…

Computation and Language · Computer Science 2024-06-13 Aman Ahluwalia , Suhrud Wani

Large Language Models (LLMs) have exhibited impressive generation capabilities, but they suffer from hallucinations when solely relying on their internal knowledge, especially when answering questions that require less commonly known…

Computation and Language · Computer Science 2023-11-01 Wenting Zhao , Ye Liu , Tong Niu , Yao Wan , Philip S. Yu , Shafiq Joty , Yingbo Zhou , Semih Yavuz

Advancements in natural language generation (NLG) and large language models (LLMs) have led to proficient text generation in various tasks. However, integrating intricate constraints into neural text generation, due to LLMs' opacity,…

Computation and Language · Computer Science 2024-03-22 Xiang Chen , Xiaojun Wan

Retrieval augmentation is critical when Language Models (LMs) exploit non-parametric knowledge related to the query through external knowledge bases before reasoning. The retrieved information is incorporated into LMs as context alongside…

Information Retrieval · Computer Science 2024-11-21 Mingzhu Wang , Yuzhe Zhang , Qihang Zhao , Junyi Yang , Hong Zhang

Despite the impressive capabilities of Multimodal Large Language Models (MLLMs) in integrating text and image modalities, challenges remain in accurately interpreting detailed visual elements. Vision detection models excel at recognizing…

Computer Vision and Pattern Recognition · Computer Science 2024-12-20 Qirui Jiao , Daoyuan Chen , Yilun Huang , Yaliang Li , Ying Shen

Large language models (LLMs) hold promise for generating plans for complex tasks, but their effectiveness is limited by sequential execution, lack of control flow models, and difficulties in skill retrieval. Addressing these issues is…

Computation and Language · Computer Science 2024-10-18 Andrei Cosmin Redis , Mohammadreza Fani Sani , Bahram Zarrin , Andrea Burattin