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Summary 1. Infectious disease outbreaks in plants threaten ecosystems, agricultural crops and food trade. Currently, several fungal diseases are affecting forests worldwide, posing a major risk to tree species, habitats and consequently…

Populations and Evolution · Quantitative Biology 2018-12-18 S. Orozco-Fuentes , G. Griffiths , M. J. Holmes , R. Ettelaie , J. Smith , A. W. Baggaley , N. G. Parker

Resource competition is a fundamental interaction in natural communities.However little is known about competition in spatial environments where organisms are able to regulate resource distributions. Here, we analyze the competition of two…

Populations and Evolution · Quantitative Biology 2011-02-24 Alexei B. Ryabov , Bernd Blasius

According to a recent investigation, an estimated 33-50% of the world's coral reefs have undergone degradation, believed to be as a result of climate change. A strong driver of climate change and the subsequent environmental impact are…

Machine Learning · Computer Science 2019-06-11 Shubhankar Deshpande , Brian D. Bue , David R. Thompson , Vijay Natraj , Mario Parente

Accurate information on the distribution of vegetation species is used as a proxy for the health of an ecosystem, a currency of international environmental treaties, and a necessary planning tool for forest preservation and rehabilitation,…

Methodology · Statistics 2023-09-20 Henry Scharf , Jonathan Schierbaum , Hana Matsumoto , Tim Assal

Enhancement of the predictive power and robustness of nonlinear population dynamics models allows ecologists to make more reliable forecasts about species' long term survival. However, the limited availability of detailed ecological data,…

Pattern Formation and Solitons · Physics 2025-04-18 Indrajyoti Gaine , Malay Banerjee

Fires and rainfall are major mechanisms that regulate woody and grassy biomasses in savanna ecosystems. Conditions of long-lasting coexistence of trees and grasses have been mainly studied using continuous-time modelling of tree-grass…

Dynamical Systems · Mathematics 2019-05-28 V. Yatat , P. Couteron , J. J. Tewa , S. Bowong , Y. Dumont

Destabilization of the water cycle threatens human lives and livelihoods. Meanwhile our understanding of whether and how changes in vegetation cover could trigger abrupt transitions in moisture regimes remains incomplete. This challenge…

Diversity patterns of tree species in a tropical forest community are approached by a simple lattice model and investigated by Monte Carlo simulations using a backtracking method. Our spatially explicit neutral model is based on a simple…

Populations and Evolution · Quantitative Biology 2015-06-04 A. Derzsi , Z. Neda

Understanding how a diversity of plants in agroecosystems affects the adaptation of pathogens in a key issue in agroecology. We analyze PDE systems describing the dynamics of adaptation of two phenotypically structured populations, under…

Analysis of PDEs · Mathematics 2021-03-08 François Hamel , Florian Lavigne , Lionel Roques

Epiphytic communities offer an original framework to disentangle the contributions of environmental filters, biotic interactions and dispersal limitations to community structure at fine spatial scales. We determine here whether variations…

Forests of the Earth are a vital carbon sink while providing an essential habitat for biodiversity. Vegetation productivity (VP) is a critical indicator of carbon uptake in the atmosphere. The leaf area index is a crucial vegetation index…

Atmospheric and Oceanic Physics · Physics 2023-10-31 Ricardo Barros Lourenço , Michael J. Smith , Sylvia Smullin , Umangi Jain , Alemu Gonsamo , Arthur Ouaknine

Mesoscale convective systems MCSs play a central role in tropical rainfall and are closely linked to extreme precipitation and large scale variability. However, a quantitative understanding of their environmental controls remains…

Computational Physics · Physics 2026-04-24 Huaiping Wang , Qiu Yang

In primates, loci associated with adaptive trait variation often fall in non-coding regions. Understanding the mechanisms linking these regulatory variants to fitness-relevant phenotypes remains challenging, but can be addressed using…

Genomics · Quantitative Biology 2025-04-04 Genevieve Housman , Audrey Arner , Amy Longtin , Christian Gagnon , Arun Durvasula , Amanda Lea

As the impending consequences of climate change loom over the Earth, it has become vital for researchers to understand the role microorganisms play in this process. In this paper, we examine how environmental factors, including moisture…

Populations and Evolution · Quantitative Biology 2023-11-30 John Blackwelder , Steven DiSilvio , Anthony Ozerov

Climate change is a major driver of biodiversity loss, changing the geographic range and abundance of many species. However, there remain significant knowledge gaps about the distribution of species, due principally to the amount of effort…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Mélisande Teng , Amna Elmustafa , Benjamin Akera , Hugo Larochelle , David Rolnick

Climate change poses an extreme threat to biodiversity, making it imperative to efficiently model the geographical range of different species. The availability of large-scale remote sensing images and environmental data has facilitated the…

Computer Vision and Pattern Recognition · Computer Science 2024-12-30 Theresa Chen , Yao-Yi Chiang

We introduce a novel interpretable tree based algorithm for prediction in a regression setting. Our motivation is to estimate the unknown regression function from a functional decomposition perspective in which the functional components…

Machine Learning · Statistics 2023-08-04 Munir Hiabu , Enno Mammen , Joseph T. Meyer

In data analysis, latent variables play a central role because they help provide powerful insights into a wide variety of phenomena, ranging from biological to human sciences. The latent tree model, a particular type of probabilistic…

Machine Learning · Computer Science 2014-02-05 Raphaël Mourad , Christine Sinoquet , Nevin L. Zhang , Tengfei Liu , Philippe Leray

We propose a model of multispecies populations surviving on distributed resources. System dynamics are investigated under changes in abiotic factors such as the climate, as parameterized through environmental temperature. In particular, we…

Populations and Evolution · Quantitative Biology 2017-10-25 I. Sudakov , S. A. Vakulenko , D. Kirievskaya , K. M. Golden

We explore the connection between migration patterns and emergent behaviors of evolving populations in spatially heterogeneous environments. Despite extensive studies in ecologically and medically important systems, a unifying framework…

Populations and Evolution · Quantitative Biology 2024-01-10 Casey O. Barkan , Shenshen Wang
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