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Progress towards quantum utility in chemistry requires not only algorithmic advances, but also the identification of chemically meaningful problems whose electronic structure fundamentally challenges classical methods. Here, we introduce a…

Chemical Physics · Physics 2026-01-19 Srivathsan Poyyapakkam Sundar , Vibin Abraham , Bo Peng , Ayush Asthana

Automatic design of organic materials requires black-box optimization in a vast chemical space. In conventional molecular design algorithms, a molecule is built as a combination of predetermined fragments. Recently, deep neural network…

Chemical Physics · Physics 2018-06-27 Xiufeng Yang , Jinzhe Zhang , Kazuki Yoshizoe , Kei Terayama , Koji Tsuda

Design of new drugs is a challenging process: a candidate molecule should satisfy multiple conditions to act properly and make the least side-effect -- perfect candidates selectively attach to and influence only targets, leaving off-targets…

Biomolecules · Quantitative Biology 2024-05-07 Andrij Rovenchak , Maksym Druchok

This study explores the potential of Generative AI chatbots (GenAIbots) such as ChatGPT and Bing Chat, in Chemistry education, within a constructionist theoretical framework. A single-case study methodology was used to analyse extensive…

Human-Computer Interaction · Computer Science 2023-05-23 Renato P. dos Santos

The recent boom in computational chemistry has enabled several projects aimed at discovering useful materials or catalysts. We acknowledge and address two recurring issues in the field of computational catalyst discovery. First, calculating…

Chemical Physics · Physics 2021-04-07 Kevin Tran , Willie Neiswanger , Kirby Broderick , Erix Xing , Jeff Schneider , Zachary W. Ulissi

Pre-training machine learning models on molecular properties has proven effective for generating robust and generalizable representations, which is critical for advancements in drug discovery and materials science. While recent work has…

Quantitative Methods · Quantitative Biology 2024-10-17 Yasir Ghunaim , Robert Hoehndorf

The automated extraction of chemical structures and their corresponding bioactivity data is essential for accelerating drug discovery and enabling data-driven research. Current optical chemical structure recognition tools lack the…

Quantitative Methods · Quantitative Biology 2026-03-04 Zhe Wang , Fangtian Fu , Wei Zhang , Lige Yan , Nan Li , Wenxia Deng , Yan Meng , Jianping Wu , Hui Wu , Wenting Wu , Gang Xu , Xiang Li , Si Chen

As Large Language Models (LLMs) advance in natural language processing, there is growing interest in leveraging their capabilities to simplify software interactions. In this paper, we propose a novel system that integrates LLMs for both…

Computation and Language · Computer Science 2024-09-19 Chunliang Tao , Xiaojing Fan , Yahe Yang

Discovering materials with new structural chemistry is key to achieving transformative functionality. Generative artificial intelligence offers a scalable route to propose candidate crystal structures. We introduce a reliable low-cost proxy…

Discovering novel stable molecules without training data remains a grand scientific challenge. Current molecular generative models are trained on large, pre-curated datasets, which introduce biases and limit exploration of novel chemistry.…

Machine Learning · Computer Science 2026-05-28 Bjarke Hastrup , Francois Cornet , Tejs Vegge , Arghya Bhowmik

Purpose: Higher education institutions face increasing pressure to audit course designs for generative AI (GenAI) integration. This paper presents an end-to-end method for using large language models (LLMs) to scan course information sheets…

Representing molecular structures effectively in chemistry remains a challenging task. Language models and graph-based models are extensively utilized within this domain, consistently achieving state-of-the-art results across an array of…

Machine Learning · Computer Science 2025-05-27 Nikolai Rekut , Alexey Orlov , Klea Ziu , Elizaveta Starykh , Martin Takac , Aleksandr Beznosikov

A novel framework for designing the molecular structure of chemical compounds with a desired chemical property has recently been proposed. The framework infers a desired chemical graph by solving a mixed integer linear program (MILP) that…

Computational Engineering, Finance, and Science · Computer Science 2023-05-02 Jianshen Zhu , Naveed Ahmed Azam , Kazuya Haraguchi , Liang Zhao , Hiroshi Nagamochi , Tatsuya Akutsu

The discovery of new energetic materials remains a pressing challenge hindered by limited availability of high-quality data. To address this, we have developed generative molecular language models that have been pretrained on extensive…

Generative AI systems such as ChatGPT have a disruptive effect on learning and assessment. Computer science requires practice to develop skills in problem solving and programming that are traditionally developed using assignments.…

Computers and Society · Computer Science 2023-11-29 Kevin Wang , Seth Akins , Abdallah Mohammed , Ramon Lawrence

Generative chemical language models (CLMs) have demonstrated strong capabilities in molecular design, yet their impact in drug discovery remains limited by the absence of reliable reward signals and the lack of interpretability in their…

Machine Learning · Computer Science 2025-07-15 Lu Zhu , Emmanuel Noutahi

Machine learning is becoming a preferred method for the virtual screening of organic materials due to its cost-effectiveness over traditional computationally demanding techniques. However, the scarcity of labeled data for organic materials…

Chemical Physics · Physics 2024-03-06 Chengwei Zhang , Yushuang Zhai , Ziyang Gong , Hongliang Duan , Yuan-Bin She , Yun-Fang Yang , An Su

Accurately predicting drug-target binding affinity (DTA) in silico is a key task in drug discovery. Most of the conventional DTA prediction methods are simulation-based, which rely heavily on domain knowledge or the assumption of having the…

Machine Learning · Computer Science 2020-04-06 Xuan Lin

The chemistry of an astrophysical environment is closely coupled to its dynamics, the latter often found to be complex. Hence, to properly model these environments a 3D context is necessary. However, solving chemical kinetics within a 3D…

Computational Physics · Physics 2024-05-07 S. Maes , F. De Ceuster , M. Van de Sande , L. Decin

Fast, efficient and accurate triggers are a critical requirement for modern high-energy physics experiments given the increasingly large quantities of data that they produce. The CEBAF Large Acceptance Spectrometer (CLAS12) employs a highly…

Instrumentation and Detectors · Physics 2023-05-31 Richard Tyson , Gagik Gavalian , David Ireland , Bryan McKinnon