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Graph representation is a powerful abstraction of real-world objects and relations. Computing the Graph Edit Distance (GED) between graphs is critical in domains such as bioinformatics, machine learning, and pattern recognition. GED…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-05 Adel Dabah , Andreas Herten

Neural Architecture Search (NAS) has demonstrated its power on various AI accelerating platforms such as Field Programmable Gate Arrays (FPGAs) and Graphic Processing Units (GPUs). However, it remains an open problem, how to integrate NAS…

Machine Learning · Computer Science 2020-02-12 Lei Yang , Zheyu Yan , Meng Li , Hyoukjun Kwon , Liangzhen Lai , Tushar Krishna , Vikas Chandra , Weiwen Jiang , Yiyu Shi

In this paper we present a novel loss function, called class-agnostic segmentation (CAS) loss. With CAS loss the class descriptors are learned during training of the network. We don't require to define the label of a class a-priori, rather…

Computer Vision and Pattern Recognition · Computer Science 2020-10-29 Angira Sharma , Naeemullah Khan , Ganesh Sundaramoorthi , Philip Torr

We demonstrate a high-performance vendor-agnostic method for massively parallel solving of ensembles of ordinary differential equations (ODEs) and stochastic differential equations (SDEs) on GPUs. The method is integrated with a widely used…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-20 Utkarsh Utkarsh , Valentin Churavy , Yingbo Ma , Tim Besard , Prakitr Srisuma , Tim Gymnich , Adam R. Gerlach , Alan Edelman , George Barbastathis , Richard D. Braatz , Christopher Rackauckas

Single-cell sequencing technologies reveal cellular heterogeneity at high resolution, advancing our understanding of biological complexity. As datasets start to scale to tens of millions of cells, computational workflows face substantial…

Automatic Differentiation (AD) is instrumental for science and industry. It is a tool to evaluate the derivative of a function specified through a computer program. The range of AD application domain spans from Machine Learning to Robotics…

Mathematical Software · Computer Science 2023-03-01 Ioana Ifrim , Vassil Vassilev , David J Lange

Xilinx's AI Engine is a recent industry example of energy-efficient vector processing that includes novel support for 2D SIMD datapaths and shuffle interconnection network. The current approach to programming the AI Engine relies on a C/C++…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-03 Prasanth Chatarasi , Stephen Neuendorffer , Samuel Bayliss , Kees Vissers , Vivek Sarkar

GPUSPH was the first implementation of the weakly-compressible Smoothed Particle Hydrodynamics method to run entirely on GPU using CUDA. Version 5, released in June 2018, features a radical restructuring of the code, offering a more…

Computational Physics · Physics 2023-05-18 Giuseppe Bilotta , Vito Zago , Alexis Hérault , Hendrik D. van Ettinger , Robert A. Dalrymple

The release of tabular benchmarks, such as NAS-Bench-101 and NAS-Bench-201, has significantly lowered the computational overhead for conducting scientific research in neural architecture search (NAS). Although they have been widely adopted…

Graph embedding techniques have attracted growing interest since they convert the graph data into continuous and low-dimensional space. Effective graph analytic provides users a deeper understanding of what is behind the data and thus can…

Machine Learning · Computer Science 2022-01-21 Azita Nouri , Philip E. Davis , Pradeep Subedi , Manish Parashar

Graph Neural Networks (GNNs) are emerging as a powerful tool for learning from graph-structured data and performing sophisticated inference tasks in various application domains. Although GNNs have been shown to be effective on modest-sized…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-29 Jeongmin Brian Park , Vikram Sharma Mailthody , Zaid Qureshi , Wen-mei Hwu

Scaling laws guide large language model training by relating compute to cross-entropy loss, and recent work further extends them to predict downstream benchmark performance. However, prior approaches face generalization limitations from two…

Computation and Language · Computer Science 2026-05-28 Quanen Sun , Changxin Tian , Ke Shi , Cai Chen , Cunyin Peng , Jia Liu , Kunlong Chen , Zhiqiang Zhang

Approximate nearest neighbor search (ANNS) in high-dimensional vector spaces has a wide range of real-world applications. Numerous methods have been proposed to handle ANNS efficiently, while graph-based indexes have gained prominence due…

Databases · Computer Science 2025-08-14 Zhonggen Li , Xiangyu Ke , Yifan Zhu , Bocheng Yu , Baihua Zheng , Yunjun Gao

Testing Advanced Driving Assistance Systems (ADAS), such as lane-keeping functions, requires creating road topologies or using predefined benchmarks. However, the test cases in existing ADAS benchmarks are often designed in specific formats…

Software Engineering · Computer Science 2025-02-13 Qurban Ali , Andrea Stocco , Leonardo Mariani , Oliviero Riganelli

Nanopore sequencing enables real-time long-read DNA sequencing with reads exceeding 10 kilobases, but inherent error rates of 12-15 percent present significant computational challenges for read alignment. The critical seed chaining step…

Genomics · Quantitative Biology 2025-11-05 Jahidul Arafat , Sanjaya Poudel

Many applications require to learn, mine, analyze and visualize large-scale graphs. These graphs are often too large to be addressed efficiently using conventional graph processing technologies. Many applications have requirements to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-23 Santosh Pandey , Lingda Li , Adolfy Hoisie , Xiaoye S. Li , Hang Liu

Recent studies have demonstrated the potential of Large Language Models (LLMs) in generating GPU Kernels. Current benchmarks focus on the translation of high-level languages into CUDA, overlooking the more general and challenging task of…

Machine Learning · Computer Science 2026-03-04 Jiace Zhu , Wentao Chen , Qi Fan , Zhixing Ren , Junying Wu , Xing Zhe Chai , Chotiwit Rungrueangwutthinon , Yehan Ma , An Zou

Graph neural networks (GNNs) have achieved state-of-the-art performance in various graph-based tasks. However, as mainstream GNNs are designed based on the neural message passing mechanism, they do not scale well to data size and message…

Machine Learning · Computer Science 2022-03-02 Wentao Zhang , Yu Shen , Zheyu Lin , Yang Li , Xiaosen Li , Wen Ouyang , Yangyu Tao , Zhi Yang , Bin Cui

Deep learning approaches achieve prominent success in 3D semantic segmentation. However, collecting densely annotated real-world 3D datasets is extremely time-consuming and expensive. Training models on synthetic data and generalizing on…

Computer Vision and Pattern Recognition · Computer Science 2022-07-22 Runyu Ding , Jihan Yang , Li Jiang , Xiaojuan Qi

In recent years, the CNNs have achieved great successes in the image processing tasks, e.g., image recognition and object detection. Unfortunately, traditional CNN's classification is found to be easily misled by increasingly complex image…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-12 Xingyao Zhang , Shuaiwen Leon Song , Chenhao Xie , Jing Wang , Weigong Zhang , Xin Fu
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