Related papers: NeuralTSNE: A Python Package for the Dimensionalit…
In this work, the use of t-SNE is proposed to embed 3D point clouds of plants into 2D space for plant characterization. It is demonstrated that t-SNE operates as a practical tool to flatten and visualize a complete 3D plant model in 2D…
TSNE and UMAP are two of the most popular dimensionality reduction algorithms due to their speed and interpretable low-dimensional embeddings. However, while attempts have been made to improve on TSNE's computational complexity, no existing…
Data visualisation helps understanding data represented by multiple variables, also called features, stored in a large matrix where individuals are stored in lines and variable values in columns. These data structures are frequently called…
Nonlinear dimension reduction (NLDR) techniques such as tSNE, and UMAP provide a low-dimensional representation of high-dimensional data ($p\text{-}D$) by applying a nonlinear transformation. NLDR often exaggerates random patterns. But NLDR…
Adversarial examples, designed to trick Artificial Neural Networks (ANNs) into producing wrong outputs, highlight vulnerabilities in these models. Exploring these weaknesses is crucial for developing defenses, and so, we propose a method to…
Stochastic Neighbor Embedding (SNE) is a manifold learning and dimensionality reduction method with a probabilistic approach. In SNE, every point is consider to be the neighbor of all other points with some probability and this probability…
We carry out a Bayesian analysis of dark matter (DM) direct detection data to determine particle model parameters using the Truncated Marginal Neural Ratio Estimation (TMNRE) machine learning technique. TMNRE avoids an explicit calculation…
Correct risk estimation of policyholders is of great significance to auto insurance companies. While the current tools used in this field have been proven in practice to be quite efficient and beneficial, we argue that there is still a lot…
SchNetPack is a toolbox for the development and application of deep neural networks to the prediction of potential energy surfaces and other quantum-chemical properties of molecules and materials. It contains basic building blocks of…
The recent advancements in computational power and machine learning algorithms have led to vast improvements in manifold areas of research. Especially in finance, the application of machine learning enables both researchers and…
The t-distributed Stochastic Neighbor Embedding (t-SNE) is a powerful and popular method for visualizing high-dimensional data. It minimizes the Kullback-Leibler (KL) divergence between the original and embedded data distributions. In this…
Low-dimensional embeddings and visualizations are an indispensable tool for analysis of high-dimensional data. State-of-the-art methods, such as tSNE and UMAP, excel in unveiling local structures hidden in high-dimensional data and are…
Widely used pipelines for analyzing high-dimensional data utilize two-dimensional visualizations. These are created, for instance, via t-distributed stochastic neighbor embedding (t-SNE). A crucial element of the t-SNE embedding procedure…
In this work, we present a general purpose deep neural network package for representing energies, forces, dipole moments, and polarizabilities of atomistic systems. This so-called recursively embedded atom neural network model takes both…
Dimensionality reduction and manifold learning methods such as t-Distributed Stochastic Neighbor Embedding (t-SNE) are routinely used to map high-dimensional data into a 2-dimensional space to visualize and explore the data. However, two…
Deep neural networks (DNN) have been used to model nonlinear relations between physical quantities. Those DNNs are embedded in physical systems described by partial differential equations (PDE) and trained by minimizing a loss function that…
We present a new method GTSNE to visualize high-dimensional data points in the two dimensional map. The technique is a variation of t-SNE that produces better visualizations by capturing both the local neighborhood structure and the macro…
Non-linear dimensionality reduction (NLDR) methods such as t-distributed stochastic neighbour embedding (t-SNE) are ubiquitous in the natural sciences, however, the appropriate use of these methods is difficult because of their complex…
T-distributed stochastic neighbour embedding (t-SNE) is a widely used data visualisation technique. It differs from its predecessor SNE by the low-dimensional similarity kernel: the Gaussian kernel was replaced by the heavy-tailed Cauchy…
There has been a considerable interest in constrained training of deep neural networks (DNNs) recently for applications such as fairness and safety. Several toolkits have been proposed for this task, yet there is still no industry standard.…