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Large language models (LLMs) are rapidly transforming various domains, including biomedicine and healthcare, and demonstrate remarkable potential from scientific research to new drug discovery. Graph-based retrieval-augmented generation…

Quantitative Methods · Quantitative Biology 2025-11-14 Guofeng Meng , Li Shen , Qiuyan Zhong , Wei Wang , Haizhou Zhang , Xiaozhen Wang

Retrieval-augmented generation (RAG) empowers large language models to access external and private corpus, enabling factually consistent responses in specific domains. By exploiting the inherent structure of the corpus, graph-based RAG…

Artificial Intelligence · Computer Science 2025-04-17 Tianyang Xu , Haojie Zheng , Chengze Li , Haoxiang Chen , Yixin Liu , Ruoxi Chen , Lichao Sun

Large Vision-Language Models (LVLMs) have made remarkable strides in multimodal tasks such as visual question answering, visual grounding, and complex reasoning. However, they remain limited by static training data, susceptibility to…

Artificial Intelligence · Computer Science 2025-08-27 Chan-Wei Hu , Yueqi Wang , Shuo Xing , Chia-Ju Chen , Suofei Feng , Ryan Rossi , Zhengzhong Tu

Knowledge Graph-based Retrieval-Augmented Generation (KG-RAG) significantly enhances the reasoning capabilities of LargeLanguage Models by leveraging structured knowledge. However, existing KG-RAG frameworks typically operate as open-loop…

Information Retrieval · Computer Science 2025-08-14 Xujie Yuan , Shimin Di , Jielong Tang , Libin Zheng , Jian Yin

Recent advances in large language models (LLMs) have led to impressive progress in natural language generation, yet their tendency to produce hallucinated or unsubstantiated content remains a critical concern. To improve factual…

Computation and Language · Computer Science 2025-05-20 Xukai Liu , Ye Liu , Shiwen Wu , Yanghai Zhang , Yihao Yuan , Kai Zhang , Qi Liu

Large language models (LLMs) have achieved strong empirical performance in various fields, benefiting from their huge amount of parameters that store knowledge. However, LLMs still suffer from several key issues, such as hallucination…

Computation and Language · Computer Science 2026-05-20 Shangyu Wu , Ying Xiong , Yufei Cui , Haolun Wu , Can Chen , Ye Yuan , Lianming Huang , Xue Liu , Tei-Wei Kuo , Nan Guan , Chun Jason Xue

Retrieval-augmented generation (RAG) has shown impressive capability in providing reliable answer predictions and addressing hallucination problems. A typical RAG implementation uses powerful retrieval models to extract external information…

Information Retrieval · Computer Science 2024-11-19 Ziwei Liu , Liang Zhang , Qian Li , Jianghua Wu , Guangxu Zhu

While Retrieval-Augmented Generation (RAG) systems enhance Large Language Models (LLMs) by incorporating external knowledge, they still face persistent challenges in retrieval inefficiency and the inability of LLMs to filter out irrelevant…

Computation and Language · Computer Science 2025-02-13 Ruobing Yao , Yifei Zhang , Shuang Song , Yuhua Liu , Neng Gao , Chenyang Tu

Knowledge Graphs (KGs) represent human-crafted factual knowledge in the form of triplets (head, relation, tail), which collectively form a graph. Question Answering over KGs (KGQA) is the task of answering natural questions grounding the…

Computation and Language · Computer Science 2024-05-31 Costas Mavromatis , George Karypis

Large language models (LLMs) inherently display hallucinations since the precision of generated texts cannot be guaranteed purely by the parametric knowledge they include. Although retrieval-augmented generation (RAG) systems enhance the…

Artificial Intelligence · Computer Science 2025-02-18 Bingyu Wan , Fuxi Zhang , Zhongpeng Qi , Jiayi Ding , Jijun Li , Baoshi Fan , Yijia Zhang , Jun Zhang

The integration of Large Language Models (LLMs) with Graph Representation Learning (GRL) marks a significant evolution in analyzing complex data structures. This collaboration harnesses the sophisticated linguistic capabilities of LLMs to…

Machine Learning · Computer Science 2024-02-12 Qiheng Mao , Zemin Liu , Chenghao Liu , Zhuo Li , Jianling Sun

This paper presents OG-RAG, an Ontology-Grounded Retrieval Augmented Generation method designed to enhance LLM-generated responses by anchoring retrieval processes in domain-specific ontologies. While LLMs are widely used for tasks like…

Computation and Language · Computer Science 2024-12-23 Kartik Sharma , Peeyush Kumar , Yunqing Li

Recent large language model (LLM) reasoning, despite its success, suffers from limited domain knowledge, susceptibility to hallucinations, and constrained reasoning depth, particularly in small-scale models deployed in resource-constrained…

Artificial Intelligence · Computer Science 2025-03-04 Wenjie Wu , Yongcheng Jing , Yingjie Wang , Wenbin Hu , Dacheng Tao

Recommender systems have become increasingly vital in our daily lives, helping to alleviate the problem of information overload across various user-oriented online services. The emergence of Large Language Models (LLMs) has yielded…

Information Retrieval · Computer Science 2025-05-29 Shijie Wang , Wenqi Fan , Yue Feng , Shanru Lin , Xinyu Ma , Shuaiqiang Wang , Dawei Yin

As large language models (LLMs) evolve, their ability to deliver personalized and context-aware responses offers transformative potential for improving user experiences. Existing personalization approaches, however, often rely solely on…

Retrieval-Augmented Generation (RAG) systems combine Large Language Models (LLMs) with external knowledge, and their performance depends heavily on how that knowledge is represented. This study investigates how different Knowledge Graph…

Information Retrieval · Computer Science 2025-11-11 Tiago da Cruz , Bernardo Tavares , Francisco Belo

Large Language Models (LLMs) are adept at generating responses based on information within their context. While this ability is useful for interacting with structured data like code files, another popular method, Retrieval-Augmented…

Computation and Language · Computer Science 2025-10-22 Mihir Gupte , Paolo Giusto , Ramesh S

Although Large Language Models (LLMs) have demonstrated remarkable progress, their proficiency in graph-related tasks remains notably limited, hindering the development of truly general-purpose models. Previous attempts, including…

Machine Learning · Computer Science 2025-08-20 Xiaojun Guo , Ang Li , Yifei Wang , Stefanie Jegelka , Yisen Wang

Large language models (LLMs), while exhibiting exceptional performance, suffer from hallucinations, especially on knowledge-intensive tasks. Existing works propose to augment LLMs with individual text units retrieved from external knowledge…

Computation and Language · Computer Science 2024-10-04 Bowen Jin , Chulin Xie , Jiawei Zhang , Kashob Kumar Roy , Yu Zhang , Zheng Li , Ruirui Li , Xianfeng Tang , Suhang Wang , Yu Meng , Jiawei Han

Programming languages possess rich semantic information - such as data flow - that is represented by graphs and not available from the surface form of source code. Recent code language models have scaled to billions of parameters, but model…

Computation and Language · Computer Science 2025-09-24 Ziyin Zhang , Hang Yu , Shijie Li , Peng Di , Jianguo Li , Rui Wang
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