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We analyst in detail a new approach to the monitoring and forecasting of the onset of transitions in high dimensional complex systems (see Phys. Rev. Lett . vol. 113, 264102 (2014)) by application to the Tangled Nature Model of evolutionary…

Adaptation and Self-Organizing Systems · Physics 2015-08-03 Duccio Piovani , Jelena Grujic , Henrik Jeldtoft Jensen

The Dynamic Mode Decomposition (DMD)---a popular method for performing data-driven Koopman spectral analysis---has gained increased adoption as a technique for extracting dynamically meaningful spatio-temporal descriptions of fluid flows…

Fluid Dynamics · Physics 2017-07-13 Maziar S. Hemati , Clarence W. Rowley , Eric A. Deem , Louis N. Cattafesta

Understanding the dynamic nature of biological systems is fundamental to deciphering cellular behavior, developmental processes, and disease progression. Single-cell RNA sequencing (scRNA-seq) has provided static snapshots of gene…

Quantitative Methods · Quantitative Biology 2025-05-02 Zhenyi Zhang , Yuhao Sun , Qiangwei Peng , Tiejun Li , Peijie Zhou

Operating in environments alongside humans requires robots to make decisions under uncertainty. In addition to exogenous dynamics, they must reason over others' hidden mental-models and mental-states. While Interactive POMDPs and Bayesian…

Robotics · Computer Science 2026-02-04 Kevin Alcedo , Pedro U. Lima , Rachid Alami

The Schr\"odinger bridge problem (SBP) finds the most likely stochastic evolution between two probability distributions given a prior stochastic evolution. As well as applications in the natural sciences, problems of this kind have…

Machine Learning · Statistics 2022-05-31 Francisco Vargas , Pierre Thodoroff , Neil D. Lawrence , Austen Lamacraft

Existing cell instance segmentation pipelines typically combine deterministic predictions with post-processing, which imposes limited explicit constraints on the global structure of instance masks. In this work, we propose a multi-task…

Computer Vision and Pattern Recognition · Computer Science 2026-04-15 Hayato Inoue , Shota Harada , Shumpei Takezaki , Ryoma Bise

The dynamic Schr\"odinger bridge problem provides an appealing setting for solving constrained time-series data generation tasks posed as optimal transport problems. It consists of learning non-linear diffusion processes using efficient…

Machine Learning · Computer Science 2023-11-27 Ella Tamir , Martin Trapp , Arno Solin

The analysis of dynamical systems is a fundamental tool in the natural sciences and engineering. It is used to understand the evolution of systems as large as entire galaxies and as small as individual molecules. With predefined conditions…

Machine Learning · Statistics 2024-12-19 Ludwig Winkler

We present Fractional Diffusion Bridge Models (FDBM), a novel generative diffusion bridge framework driven by an approximation of the rich and non-Markovian fractional Brownian motion (fBM). Real stochastic processes exhibit a degree of…

Spatio-temporal graph (STG) forecasting is a critical task with extensive applications in the real world, including traffic and weather forecasting. Although several recent methods have been proposed to model complex dynamics in STGs,…

Machine Learning · Computer Science 2024-06-18 Jinhyeok Choi , Heehyeon Kim , Minhyeong An , Joyce Jiyoung Whang

Measurement-induced state disturbance is a major challenge in obtaining quantum statistics at multiple time points. We propose a method to extract dynamic information from a quantum system at intermediate time points, namely snapshotting…

We propose sequential Monte Carlo (SMC) methods for sampling the posterior distribution of state-space models under highly informative observation regimes, a situation in which standard SMC methods can perform poorly. A special case is…

Computation · Statistics 2015-07-10 Pierre Del Moral , Lawrence M. Murray

Modeling the evolution of high-dimensional systems from limited snapshot observations at irregular time points poses a significant challenge in quantitative biology and related fields. Traditional approaches often rely on dimensionality…

Machine Learning · Computer Science 2025-08-07 Justin Lee , Behnaz Moradijamei , Heman Shakeri

Modern distribution matching algorithms for training diffusion or flow models directly prescribe the time evolution of the marginal distributions between two boundary distributions. In this work, we consider a generalized distribution…

There has been great interest in recent years on statistical models for dynamic networks. In this paper, I propose a stochastic block transition model (SBTM) for dynamic networks that is inspired by the well-known stochastic block model…

Social and Information Networks · Computer Science 2016-07-11 Kevin S. Xu

Generative diffusion models use time-forward and backward stochastic differential equations to connect the data and prior distributions. While conventional diffusion models (e.g., score-based models) only learn the backward process, more…

Machine Learning · Computer Science 2024-12-25 Kentaro Kaba , Reo Shimizu , Masayuki Ohzeki , Yuki Sughiyama

We propose to learn the time-varying stochastic computational resource usage of software as a graph structured Schr\"odinger bridge problem. In general, learning the computational resource usage from data is challenging because resources…

Optimization and Control · Mathematics 2025-05-21 Georgiy A. Bondar , Robert Gifford , Linh Thi Xuan Phan , Abhishek Halder

We present a method called Manifold Interpolating Optimal-Transport Flow (MIOFlow) that learns stochastic, continuous population dynamics from static snapshot samples taken at sporadic timepoints. MIOFlow combines dynamic models, manifold…

Human behavior has the nature of indeterminacy, which requires the pedestrian trajectory prediction system to model the multi-modality of future motion states. Unlike existing stochastic trajectory prediction methods which usually use a…

Computer Vision and Pattern Recognition · Computer Science 2022-03-28 Tianpei Gu , Guangyi Chen , Junlong Li , Chunze Lin , Yongming Rao , Jie Zhou , Jiwen Lu

Predicting the future in real-world settings, particularly from raw sensory observations such as images, is exceptionally challenging. Real-world events can be stochastic and unpredictable, and the high dimensionality and complexity of…

Computer Vision and Pattern Recognition · Computer Science 2018-03-07 Mohammad Babaeizadeh , Chelsea Finn , Dumitru Erhan , Roy H. Campbell , Sergey Levine