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Science reproducibility is a cornerstone feature in scientific workflows. In most cases, this has been implemented as a way to exactly reproduce the computational steps taken to reach the final results. While these steps are often…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-21 Karan Vahi , Mats Rynge , George Papadimitriou , Duncan A. Brown , Rajiv Mayani , Rafael Ferreira da Silva , Ewa Deelman , Anirban Mandal , Eric Lyons , Michael Zink

FAIR Digital Object (FDO) is an emerging concept that is highlighted by European Open Science Cloud (EOSC) as a potential candidate for building a ecosystem of machine-actionable research outputs. In this work we systematically evaluate FDO…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-07 Stian Soiland-Reyes , Carole Goble , Paul Groth

According to the FAIR (findability, accessibility, interoperability, and reusability) principles, scientific data should always be stored with machine-readable descriptive metadata. Existing solutions to store data with metadata, such as…

Databases · Computer Science 2024-09-12 Albert K. Engstfeld , Johannes M. Hermann , Nicolas G. Hörmann , Julian Rüth

Ecological research increasingly relies on integrating heterogeneous datasets and knowledge to explain and predict complex phenomena. Yet, differences in data types, terminology, and documentation often hinder interoperability, reuse, and…

In the field of computational science and engineering, workflows often entail the application of various software, for instance, for simulation or pre- and postprocessing. Typically, these components have to be combined in arbitrarily…

Software Engineering · Computer Science 2022-11-15 Philipp Diercks , Dennis Gläser , Ontje Lünsdorf , Michael Selzer , Bernd Flemisch , Jörg F. Unger

Scientists rely on simulations to study natural phenomena. Trusting the simulation results is vital to develop sciences in any field. One approach to build trust is to ensure the reproducibility and traceability of the simulations through…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-21 Paula Olaya , Jay Lofstead , Michela Taufer

The transformations, analyses and interpretations of data in scientific workflows are vital for the repeatability and reliability of scientific workflows. This provenance of scientific workflows has been effectively carried out in Grid…

Databases · Computer Science 2016-11-18 Khawar Hasham , Kamran Munir , Jetendr Shamdasani , Richard McClatchey

To satisfy the principles of FAIR software, software sustainability and software citation, research software must be formally published. Publication repositories make this possible and provide published software versions with unique and…

Software Engineering · Computer Science 2022-01-25 Stephan Druskat , Oliver Bertuch , Guido Juckeland , Oliver Knodel , Tobias Schlauch

The development of a knowledge repository for climate science data is a multidisciplinary effort between the domain experts (climate scientists), data engineers whos skills include design and building a knowledge repository, and machine…

Digital Libraries · Computer Science 2023-04-13 Mark Roantree , Branislava Lalic , Stevan Savic , Dragan Milosevic , Michael Scriney

FAIR Digital Objects support research data management aligned with the FAIR principles. To be machine-actionable, they must support operations that interact with their contents. This can be achieved by associating operations with FAIR-DO…

Digital Libraries · Computer Science 2025-10-14 Maximilian Inckmann , Nicolas Blumenröhr , Rossella Aversa

In the context of collaborative AI research and development projects, it would be ideal to have self-contained encapsulated algorithms that can be easily shared between different parties, executed and validated on data at different sites,…

Software Engineering · Computer Science 2025-09-12 Hans Meine , Yongli Mou , Guido Prause , Horst Hahn

Fairness is one of the most commonly identified ethical principles in existing AI guidelines, and the development of fair AI-enabled systems is required by new and emerging AI regulation. But most approaches to addressing the fairness of…

This document focuses on databases disseminating data on (hazardous) substances found on the North American and the European (EU) market. The goal is to analyse the FAIRness (Findability, Accessibility, Interoperability and Reusability) of…

Computers and Society · Computer Science 2024-07-23 Marcos Da Silveira , Oona Freudenthal , Louis Deladiennee

Increasingly, artificial intelligence (AI) and machine learning (ML) are used in eScience applications [9]. While these approaches have great potential, the literature has shown that ML-based approaches frequently suffer from results that…

Machine Learning · Computer Science 2024-07-03 Zhiwei Li , Carl Kesselman , Mike D'Arch , Michael Pazzani , Benjamin Yizing Xu

Scientists strive to make their datasets available in open repositories, with the goal that they be findable, accessible, interoperable, and reusable (FAIR). Although it is hard for most investigators to remember all the guiding principles…

Digital Libraries · Computer Science 2025-07-31 Mark A. Musen , Martin J. O'Connor , Josef Hardi , Marcos Martinez-Romero

Small to medium-scale data science experiments often rely on research software developed ad-hoc by individual scientists or small teams. Often there is no time to make the research software fast, reusable, and open access. The consequence…

Software Engineering · Computer Science 2022-11-10 Moritz Schubotz , Ankit Satpute , Andre Greiner-Petter , Akiko Aizawa , Bela Gipp

In the age of big data, it is important for primary research data to follow the FAIR principles of findability, accessibility, interoperability, and reusability. Data harmonization enhances interoperability and reusability by aligning…

Databases · Computer Science 2025-03-26 Jimmy K. Yu , Marcos Martínez-Romero , Matthew Horridge , Mete U. Akdogan , Mark A. Musen

Over the past few decades, ubiquitous sensors and systems have been an integral part of humans' everyday life. They augment human capabilities and provide personalized experiences across diverse contexts such as healthcare, education, and…

Human-Computer Interaction · Computer Science 2023-08-21 Han Zhang , Leijie Wang , Yilun Sheng , Xuhai Xu , Jennifer Mankoff , Anind K. Dey
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