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Until recently, uncertainty quantification in low energy nuclear theory was typically performed using frequentist approaches. However in the last few years, the field has shifted toward Bayesian statistics for evaluating confidence…

Nuclear Theory · Physics 2019-07-24 G. B. King , A. E. Lovell , L. Neufcourt , F. M. Nunes

Uncertainty quantification is vital for decision-making and risk assessment in machine learning. Mean-variance regression models, which predict both a mean and residual noise for each data point, provide a simple approach to uncertainty…

Machine Learning · Statistics 2025-12-01 Eliot Wong-Toi , Alex Boyd , Vincent Fortuin , Stephan Mandt

Inverse problems and regularization theory is a central theme in contemporary signal processing, where the goal is to reconstruct an unknown signal from partial indirect, and possibly noisy, measurements of it. A now standard method for…

Optimization and Control · Mathematics 2014-12-09 Samuel Vaiter , Gabriel Peyré , Jalal M. Fadili

A general many quantiles + noise model is studied in the robust formulation (allowing non-normal, non-independent observations), where the identifiability requirement for the noise is formulated in terms of quantiles rather than the…

Statistics Theory · Mathematics 2022-11-21 Eduard Belitser , Paulo Serra , Alexandra Vegelien

We present a framework to transform the problem of finding a Lyapunov function of a Chemical Reaction Network (CRN) in concentration coordinates with arbitrary monotone kinetics into finding a common Lyapunov function for a linear parameter…

Optimization and Control · Mathematics 2017-10-31 M. Ali Al-Radhawi , David Angeli

Complex data in social and natural sciences find effective representation through networks, wherein quantitative and categorical information can be associated with nodes and connecting edges. The internal structure of networks can be…

Social and Information Networks · Computer Science 2024-08-07 Fabio Morea , Domenico De Stefano

This article proposes diffusion LMS strategies for distributed estimation over adaptive networks that are able to exploit sparsity in the underlying system model. The approach relies on convex regularization, common in compressive sensing,…

Machine Learning · Computer Science 2015-06-05 Paolo Di Lorenzo , Ali H. Sayed

Neural networks are hypothesized to implement interpretable causal mechanisms, yet verifying this requires finding a causal abstraction -- a simpler, high-level Structural Causal Model (SCM) faithful to the network under interventions.…

Machine Learning · Computer Science 2026-03-02 Amir Asiaee

We derive the Hessian geometric structure of nonequilibrium chemical reaction networks (CRN) on the flux and force spaces induced by the Legendre duality of convex dissipation functions and characterize their dynamics as a generalized flow.…

Chemical Physics · Physics 2022-06-03 Tetsuya J. Kobayashi , Dimitri Loutchko , Atsushi Kamimura , Yuki Sughiyama

Uncertainty quantification is central to safe and efficient deployments of deep learning models, yet many computationally practical methods lack lacking rigorous theoretical motivation. Random network distillation (RND) is a lightweight…

Machine Learning · Computer Science 2026-02-27 Moritz A. Zanger , Yijun Wu , Pascal R. Van der Vaart , Wendelin Böhmer , Matthijs T. J. Spaan

Explainable Graph Neural Networks (GNNs) have been developed and applied to drug-protein binding prediction to identify the key chemical structures in a drug that have active interactions with the target proteins. However, the key…

Biomolecules · Quantitative Biology 2023-09-25 Yang Wang , Zanyu Shi , Timothy Richardson , Kun Huang , Pathum Weerawarna , Yijie Wang

Counterexample generation is an indispensable part of model checking process. In stochastic model checking, counterexample generation is a challenging problem as it is not enough to find a single trace that violates the given property.…

Logic in Computer Science · Computer Science 2022-07-13 Mohammad Ahmadi , Zhen Zhang , Chris Myers , Chris Winstead , Hao Zheng

Through one decade's development, the kernel-based regularization method (KRM) has become a complement to the classical maximum likelihood/prediction error method and an emerging new system identification paradigm. One recent example is its…

Systems and Control · Electrical Eng. & Systems 2024-10-29 Xiaozhu Fang , Tianshi Chen

Deep neural networks are in the limelight of machine learning with their excellent performance in many data-driven applications. However, they can lead to inaccurate predictions when queried in out-of-distribution data points, which can…

Machine Learning · Computer Science 2023-03-01 Yana Stoyanova , Soroush Ghandi , Maryam Tavakol

Bayesian neural networks (BNNs) augment deep networks with uncertainty quantification by Bayesian treatment of the network weights. However, such models face the challenge of Bayesian inference in a high-dimensional and usually…

Machine Learning · Computer Science 2021-03-30 Zhijie Deng , Yucen Luo , Jun Zhu , Bo Zhang

In semi-supervised medical image segmentation, most previous works draw on the common assumption that higher entropy means higher uncertainty. In this paper, we investigate a novel method of estimating uncertainty. We observe that, when…

Computer Vision and Pattern Recognition · Computer Science 2021-10-19 Yinghuan Shi , Jian Zhang , Tong Ling , Jiwen Lu , Yefeng Zheng , Qian Yu , Lei Qi , Yang Gao

The robustness and anomaly detection capability of neural networks are crucial topics for their safe adoption in the real-world. Moreover, the over-parameterization of recent networks comes with high computational costs and raises questions…

Machine Learning · Computer Science 2022-07-12 Morgane Ayle , Bertrand Charpentier , John Rachwan , Daniel Zügner , Simon Geisler , Stephan Günnemann

Despite the multifaceted recent advances in interventional causal representation learning (CRL), they primarily focus on the stylized assumption of single-node interventions. This assumption is not valid in a wide range of applications, and…

Machine Learning · Computer Science 2024-12-06 Burak Varıcı , Emre Acartürk , Karthikeyan Shanmugam , Ali Tajer

Molecular computation in chemical reaction networks (CRNs) now constitutes a foundational framework for designing programmable biological systems. However, prevailing design methodologies primarily treat parallelism of chemical reactions as…

Molecular Networks · Quantitative Biology 2025-12-09 Renlei Jiang , Chuanhou Gao , Denis Dochain

Convolutional neural networks (CNNs) are extremely popular and effective for image classification tasks but tend to be overly confident in their predictions. Various works have sought to quantify uncertainty associated with these models,…

Computer Vision and Pattern Recognition · Computer Science 2026-01-12 Sara Pohland , Claire Tomlin
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