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Graph Neural Networks (GNNs) have been predominant for graph learning tasks; however, recent studies showed that a well-known graph algorithm, Label Propagation (LP), combined with a shallow neural network can achieve comparable performance…

Machine Learning · Computer Science 2022-12-01 Zhiqiang Zhong , Sergey Ivanov , Jun Pang

Deep Neural Networks (DNN) applications are increasingly becoming a part of our everyday life, from medical applications to autonomous cars. Traditional validation of DNN relies on accuracy measures, however, the existence of adversarial…

Machine Learning · Computer Science 2021-12-22 Florian Tambon , Giulio Antoniol , Foutse Khomh

Heterogeneous graph learning aims to capture complex relationships and diverse relational semantics among entities in a heterogeneous graph to obtain meaningful representations for nodes and edges. Recent advancements in heterogeneous graph…

Computation and Language · Computer Science 2024-05-21 Jiabin Tang , Yuhao Yang , Wei Wei , Lei Shi , Long Xia , Dawei Yin , Chao Huang

Graph Neural networks (GNNs) have recently become a powerful technique for many graph-related tasks including graph classification. Current GNN models apply different graph pooling methods that reduce the number of nodes and edges to learn…

Machine Learning · Computer Science 2023-03-08 Muhammad Ifte Khairul Islam , Max Khanov , Esra Akbas

Graph representation learning aim at integrating node contents with graph structure to learn nodes/graph representations. Nevertheless, it is found that many existing graph learning methods do not work well on data with high heterophily…

Machine Learning · Computer Science 2023-10-13 Jincheng Huang , Ping Li , Rui Huang , Chen Na , Acong Zhang

Graph Neural Networks (GNNs) have proven effective in various medical imaging applications, such as automated disease diagnosis. However, due to the local neighborhood aggregation paradigm in message passing which characterizes these…

Machine Learning · Computer Science 2024-11-05 K. Mancini , I. Rekik

Hypergraph, with its powerful ability to capture higher-order relationships, has gained significant attention recently. Consequently, many hypergraph representation learning methods have emerged to model the complex relationships among…

Social and Information Networks · Computer Science 2025-02-24 Tianyi Ma , Yiyue Qian , Shinan Zhang , Chuxu Zhang , Yanfang Ye

Complex systems are difficult to study not only because they are nonlinear, multiscale, and often nonstationary, but because their scientifically relevant organization is often invisible at the level of individual components, pairwise…

Physics and Society · Physics 2026-03-30 Mark M. Bailey

In this work, we theoretically demonstrate that current graph positional encodings (PEs) are not beneficial and could potentially hurt performance in tasks involving heterophilous graphs, where nodes that are close tend to have different…

Machine Learning · Computer Science 2025-04-30 Michael Ito , Jiong Zhu , Dexiong Chen , Danai Koutra , Jenna Wiens

Graph representation learning is gaining popularity in a wide range of applications, such as social networks analysis, computational biology, and recommender systems. However, different with positive results from many academic studies,…

Machine Learning · Statistics 2020-08-21 Young-Jin Park , Kyuyong Shin , Kyung-Min Kim

Graph Convolutional Networks (GCNs) have been widely applied in various fields due to their significant power on processing graph-structured data. Typical GCN and its variants work under a homophily assumption (i.e., nodes with same class…

Machine Learning · Computer Science 2021-12-28 Tao Wang , Rui Wang , Di Jin , Dongxiao He , Yuxiao Huang

Graph neural networks (GNNs) have been extensively employed in node classification. Nevertheless, recent studies indicate that GNNs are vulnerable to topological perturbations, such as adversarial attacks and edge disruptions. Considerable…

Machine Learning · Computer Science 2024-06-06 Shuqi He , Jun Zhuang , Ding Wang , Luyao Peng , Jun Song

An attributed hypergraph comprises nodes with attributes and hyperedges that connect varying numbers of nodes. Attributed hypergraph node and hyperedge embedding (AHNEE) maps nodes and hyperedges to compact vectors for use in important…

Social and Information Networks · Computer Science 2025-08-13 Yiran Li , Gongyao Guo , Chen Feng , Jieming Shi

In representation learning on the graph-structured data, under heterophily (or low homophily), many popular GNNs may fail to capture long-range dependencies, which leads to their performance degradation. To solve the above-mentioned issue,…

Machine Learning · Computer Science 2021-06-29 Mengying Jiang , Guizhong Liu , Yuanchao Su , Xinliang Wu

Graph Neural Networks (GNNs) have emerged as powerful tools for supervised machine learning over graph-structured data, while sampling-based node representation learning is widely utilized in unsupervised learning. However, scalability…

Machine Learning · Computer Science 2024-07-23 Vipul Gupta , Xin Chen , Ruoyun Huang , Fanlong Meng , Jianjun Chen , Yujun Yan

Higher-order interactions (HOIs) are ubiquitous in real-world complex systems and applications. Investigation of deep learning for HOIs, thus, has become a valuable agenda for the data mining and machine learning communities. As networks of…

Machine Learning · Computer Science 2024-07-26 Sunwoo Kim , Soo Yong Lee , Yue Gao , Alessia Antelmi , Mirko Polato , Kijung Shin

Graph neural networks (GNNs) provide a powerful and scalable solution for modeling continuous spatial data. However, they often rely on Euclidean distances to construct the input graphs. This assumption can be improbable in many real-world…

Machine Learning · Computer Science 2023-02-20 Konstantin Klemmer , Nathan Safir , Daniel B. Neill

While graph neural networks (GNNs) have gained popularity for learning circuit representations in various electronic design automation (EDA) tasks, they face challenges in scalability when applied to large graphs and exhibit limited…

Machine Learning · Computer Science 2024-04-12 Chenhui Deng , Zichao Yue , Cunxi Yu , Gokce Sarar , Ryan Carey , Rajeev Jain , Zhiru Zhang

Graph neural networks have attracted wide attentions to enable representation learning of graph data in recent works. In complement to graph convolution operators, graph pooling is crucial for extracting hierarchical representation of graph…

Machine Learning · Computer Science 2020-06-22 Xing Gao , Wenrui Dai , Chenglin Li , Hongkai Xiong , Pascal Frossard

Graph Convolutional Networks (GCNs) gained traction for graph representation learning, with recent attention on improving performance on heterophilic graphs for various real-world applications. The localized feature aggregation in a typical…

Machine Learning · Computer Science 2025-07-30 Garv Kaushik
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