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In many fields, researchers are interested in large and complex biological processes. Two important examples are gene expression and DNA methylation in genetics. One key problem is to identify aberrant patterns of these processes and…

Applications · Statistics 2012-10-03 Matthias Kormaksson , James G. Booth , Maria E. Figueroa , Ari Melnick

Unsupervised machine learning, and in particular data clustering, is a powerful approach for the analysis of datasets and identification of characteristic features occurring throughout a dataset. It is gaining popularity across scientific…

Mesoscale and Nanoscale Physics · Physics 2021-03-23 Maria El Abbassi , Jan Overbeck , Oliver Braun , Michel Calame , Herre S. J. van der Zant , Mickael L. Perrin

It is often of interest to perform clustering on longitudinal data, yet it is difficult to formulate an intuitive model for which estimation is computationally feasible. We propose a model-based clustering method for clustering objects that…

Methodology · Statistics 2020-05-19 Daniel K. Sewell , Yuguo Chen , William Bernhard , Tracy Sulkin

Face clustering is an essential task in computer vision due to the explosion of related applications such as augmented reality or photo album management. The main challenge of this task lies in the imperfectness of similarities among image…

Computer Vision and Pattern Recognition · Computer Science 2022-03-22 Xiaotian Yu , Yifan Yang , Aibo Wang , Ling Xing , Hanling Yi , Guangming Lu , Xiaoyu Wang

To cluster data is to separate samples into distinctive groups that should ideally have some cohesive properties. Today, numerous clustering algorithms exist, and their differences lie essentially in what can be perceived as ``cohesive…

Machine Learning · Statistics 2025-05-08 Louis Ohl , Pierre-Alexandre Mattei , Frédéric Precioso

Dimensionality reduction (DR) is frequently used for analyzing and visualizing high-dimensional data as it provides a good first glance of the data. However, to interpret the DR result for gaining useful insights from the data, it would…

Machine Learning · Computer Science 2019-10-16 Takanori Fujiwara , Oh-Hyun Kwon , Kwan-Liu Ma

Humans are routinely exposed to mixtures of chemical and other environmental factors, making the quantification of health effects associated with environmental mixtures a critical goal for establishing environmental policy sufficiently…

The usage of chemical imaging technologies is becoming a routine accompaniment to traditional methods in pathology. Significant technological advances have developed these next generation techniques to provide rich, spatially resolved,…

Machine Learning · Computer Science 2022-09-07 Spencer A. Thomas

Clustering in dynamic environments is of increasing importance, with broad applications ranging from real-time data analysis and online unsupervised learning to dynamic facility location problems. While meta-heuristics have shown promising…

Visual grouping is a key mechanism in human scene perception. There, it belongs to the subconscious, early processing and is key prerequisite for other high level tasks such as recognition. In this paper, we introduce an efficient, realtime…

Computer Vision and Pattern Recognition · Computer Science 2016-09-23 Dominik Alexander Klein , Dirk Schulz , Armin Bernd Cremers

Deep clustering successfully provides more effective features than conventional ones and thus becomes an important technique in current unsupervised learning. However, most deep clustering methods ignore the vital positive and negative…

Computer Vision and Pattern Recognition · Computer Science 2021-03-10 Zhiyuan Dang , Cheng Deng , Xu Yang , Heng Huang

Similarity scores in face recognition represent the proximity between pairs of images as computed by a matching algorithm. Given a large set of images and the proximities between all pairs, a similarity score space is defined. Cluster…

Computer Vision and Pattern Recognition · Computer Science 2016-05-20 Jason Grant , Patrick Flynn

We propose a nearest neighbor based clustering algorithm that results in a naturally defined hierarchy of clusters. In contrast to the agglomerative and divisive hierarchical clustering algorithms, our approach is not dependent on the…

Data Structures and Algorithms · Computer Science 2022-03-16 Kaan Gokcesu , Hakan Gokcesu

We introduce a novel profile-based patient clustering model designed for clinical data in healthcare. By utilizing a method grounded on constrained low-rank approximation, our model takes advantage of patients' clinical data and digital…

Machine Learning · Computer Science 2023-08-24 Dongjin Choi , Andy Xiang , Ozgur Ozturk , Deep Shrestha , Barry Drake , Hamid Haidarian , Faizan Javed , Haesun Park

Clustering can be used to extract insights from data or to verify some of the assumptions held by the domain experts, namely data segmentation. In the literature, few methods can be applied in clustering qualitative values using the context…

Machine Learning · Computer Science 2020-07-07 Diogo Seca , João Mendes-Moreira , Tiago Mendes-Neves , Ricardo Sousa

In machine learning and data mining, Cluster analysis is one of the most widely used unsupervised learning technique. Philosophy of this algorithm is to find similar data items and group them together based on any distance function in…

Machine Learning · Statistics 2018-10-09 Kumarjit Pathak , Jitin Kapila

In this paper we present a new dynamical systems algorithm for clustering in hyperspectral images. The main idea of the algorithm is that data points are \`pushed\' in the direction of increasing density and groups of pixels that end up in…

Computer Vision and Pattern Recognition · Computer Science 2022-07-22 William F. Basener , Alexey Castrodad , David Messinger , Jennifer Mahle , Paul Prue

This article presents a novel pretopology-based algorithm designed to address the challenges of clustering mixed data without the need for dimensionality reduction. Leveraging Disjunctive Normal Form, our approach formulates customizable…

Machine Learning · Computer Science 2025-12-04 Loup-Noe Levy , Guillaume Guerard , Sonia Djebali , Soufian Ben Amor

Deep clustering has recently emerged as a promising technique for complex data clustering. Despite the considerable progress, previous deep clustering works mostly build or learn the final clustering by only utilizing a single layer of…

Computer Vision and Pattern Recognition · Computer Science 2023-09-19 Dong Huang , Ding-Hua Chen , Xiangji Chen , Chang-Dong Wang , Jian-Huang Lai

Finding meaningful clusters in drive-by-download malware data is a particularly difficult task. Malware data tends to contain overlapping clusters with wide variations of cardinality. This happens because there can be considerable…

Cryptography and Security · Computer Science 2021-04-26 Renato Cordeiro de Amorim , Carlos David Lopez Ruiz
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