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Lensless fiber endomicroscope is an emerging tool for in-vivo microscopic imaging, where quantitative phase imaging (QPI) can be utilized as a label-free method to enhance image contrast. However, existing single-shot phase reconstruction…

Functional Magnetic Resonance Imaging (fMRI) is an advanced neuroimaging method that enables in-depth analysis of brain activity by measuring dynamic changes in the blood oxygenation level-dependent (BOLD) signals. However, the…

Machine Learning · Computer Science 2025-09-26 Hwa Hui Tew , Junn Yong Loo , Yee-Fan Tan , Xinyu Tang , Hernando Ombao , Fuad Noman , Raphael C. -W. Phan , Chee-Ming Ting

Foundation models are transforming neuroscience but are often prohibitively large, data-hungry, and difficult to deploy. Here, we introduce BrainSymphony, a lightweight and parameter-efficient foundation model with plug-and-play integration…

Quantitative Methods · Quantitative Biology 2026-02-13 Moein Khajehnejad , Forough Habibollahi , Devon Stoliker , Adeel Razi

Diffusion tensor imaging (DTI) provides crucial insights into the microstructure of the human brain, but it can be time-consuming to acquire compared to more readily available T1-weighted (T1w) magnetic resonance imaging (MRI). To address…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Shaorong Zhang , Tamoghna Chattopadhyay , Sophia I. Thomopoulos , Jose-Luis Ambite , Paul M. Thompson , Greg Ver Steeg

Despite significant advancements in automatic brain tumor segmentation methods, their performance is not guaranteed when certain MR sequences are missing. Addressing this issue, it is crucial to synthesize the missing MR images that reflect…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Jihoon Cho , Seunghyuck Park , Jinah Park

Widely adopted medical image segmentation methods, although efficient, are primarily deterministic and remain poorly amenable to natural language prompts. Thus, they lack the capability to estimate multiple proposals, human interaction, and…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Yuan Lin , Murong Xu , Marc Hölle , Chinmay Prabhakar , Andreas Maier , Vasileios Belagiannis , Bjoern Menze , Suprosanna Shit

Image fusion, a fundamental low-level vision task, aims to integrate multiple image sequences into a single output while preserving as much information as possible from the input. However, existing methods face several significant…

Computer Vision and Pattern Recognition · Computer Science 2025-03-20 Zihan Cao , Yu Zhong , Ziqi Wang , Liang-Jian Deng

Magnetic Resonance Fingerprinting (MRF) is a time-efficient approach to quantitative MRI for multiparametric tissue mapping. The reconstruction of quantitative maps requires tailored algorithms for removing aliasing artefacts from the…

Image and Video Processing · Electrical Eng. & Systems 2024-12-19 Perla Mayo , Matteo Cencini , Carolin M. Pirkl , Marion I. Menzel , Michela Tosetti , Bjoern H. Menze , Mohammad Golbabaee

Recently, diffusion models were applied to a wide range of image analysis tasks. We build on a method for image-to-image translation using denoising diffusion implicit models and include a regression problem and a segmentation problem for…

Computer Vision and Pattern Recognition · Computer Science 2022-04-07 Julia Wolleb , Robin Sandkühler , Florentin Bieder , Philippe C. Cattin

Understanding how the brain represents visual information is a fundamental challenge in neuroscience and artificial intelligence. While AI-driven decoding of neural data has provided insights into the human visual system, integrating…

Neural and Evolutionary Computing · Computer Science 2025-10-07 Dongyang Li , Haoyang Qin , Mingyang Wu , Chen Wei , Quanying Liu

Foundation models in artificial intelligence (AI) are transforming medical imaging by enabling general-purpose feature learning from large-scale, unlabeled datasets. In this work, we introduce BrainFound, a self-supervised foundation model…

Computer Vision and Pattern Recognition · Computer Science 2026-01-01 Moona Mazher , Geoff J. M. Parker , Daniel C. Alexander

Diffusion models have shown remarkable flexibility for solving inverse problems without task-specific retraining. However, existing approaches such as Manifold Preserving Guided Diffusion (MPGD) apply only a single gradient update per…

Computer Vision and Pattern Recognition · Computer Science 2025-06-10 Aditya Chakravarty

Multimodal medical image fusion (MMIF) extracts the most meaningful information from multiple source images, enabling a more comprehensive and accurate diagnosis. Achieving high-quality fusion results requires a careful balance of…

Computer Vision and Pattern Recognition · Computer Science 2025-06-19 Dan He , Weisheng Li , Guofen Wang , Yuping Huang , Shiqiang Liu

Brain decoding aims to reconstruct visual perception of human subject from fMRI signals, which is crucial for understanding brain's perception mechanisms. Existing methods are confined to the single-subject paradigm due to substantial brain…

Computer Vision and Pattern Recognition · Computer Science 2025-02-10 Yuqin Dai , Zhouheng Yao , Chunfeng Song , Qihao Zheng , Weijian Mai , Kunyu Peng , Shuai Lu , Wanli Ouyang , Jian Yang , Jiamin Wu

In this paper, we propose a method for denoising diffusion-weighted images (DWI) of the brain using a convolutional neural network trained on realistic, synthetic MR data. We compare our results to averaging of repeated scans, a widespread…

Image and Video Processing · Electrical Eng. & Systems 2022-06-02 Jakub Jurek , Andrzej Materka , Kamil Ludwisiak , Agata Majos , Kamil Gorczewski , Kamil Cepuch , Agata Zawadzka

Image cartoonization has attracted significant interest in the field of image generation. However, most of the existing image cartoonization techniques require re-training models using images of cartoon style. In this paper, we present…

Computer Vision and Pattern Recognition · Computer Science 2023-09-18 Feihong He , Gang Li , Lingyu Si , Leilei Yan , Shimeng Hou , Hongwei Dong , Fanzhang Li

Recent advances in fMRI-based image reconstruction have achieved remarkable photo-realistic fidelity. Yet, a persistent limitation remains: while reconstructed images often appear naturalistic and holistically similar to the target stimuli,…

Computer Vision and Pattern Recognition · Computer Science 2026-01-27 Lan Yang , Minghan Yang , Ke Li , Honggang Zhang , Kaiyue Pang , Yi-Zhe Song

Multi-modality magnetic resonance imaging (MRI) is essential for the diagnosis and treatment of brain tumors. However, missing modalities are commonly observed due to limitations in scan time, scan corruption, artifacts, motion, and…

Image and Video Processing · Electrical Eng. & Systems 2025-01-08 Xiaojiao Xiao , Qinmin Vivian Hu , Guanghui Wang

Denoising diffusion models (DDMs) have led to staggering performance leaps in image generation, editing and restoration. However, existing DDMs use very large datasets for training. Here, we introduce a framework for training a DDM on a…

Computer Vision and Pattern Recognition · Computer Science 2023-06-08 Vladimir Kulikov , Shahar Yadin , Matan Kleiner , Tomer Michaeli

Reconstructing perceived images from human brain activity forms a crucial link between human and machine learning through Brain-Computer Interfaces. Early methods primarily focused on training separate models for each individual to account…

Computer Vision and Pattern Recognition · Computer Science 2025-01-27 Zhibo Tian , Ruijie Quan , Fan Ma , Kun Zhan , Yi Yang
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