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Similarity metrics such as representational similarity analysis (RSA) and centered kernel alignment (CKA) have been used to compare layer-wise representations between neural networks. However, these metrics are confounded by the population…

Machine Learning · Statistics 2022-02-02 Tianyu Cui , Yogesh Kumar , Pekka Marttinen , Samuel Kaski

Understanding representational similarity between neural recordings and computational models is essential for neuroscience, yet remains challenging to measure reliably due to the constraints on the number of neurons that can be recorded…

Disordered Systems and Neural Networks · Physics 2025-10-27 Hyunmo Kang , Abdulkadir Canatar , SueYeon Chung

Biological brains have the capability to adaptively coordinate relevant neuronal populations based on the task context to learn continuously changing tasks in real-world environments. However, existing spiking neural network-based continual…

Neural and Evolutionary Computing · Computer Science 2024-11-12 Bing Han , Feifei Zhao , Yang Li , Qingqun Kong , Xianqi Li , Yi Zeng

Spike-frequency adaptation (SFA) is a fundamental neuronal mechanism taking into account the fatigue due to spike emissions and the consequent reduction of the firing activity. We have studied the effect of this adaptation mechanism on the…

Disordered Systems and Neural Networks · Physics 2023-03-08 Alberto Ferrara , David Angulo-Garcia , Alessandro Torcini , Simona Olmi

In both artificial and biological systems, the centered kernel alignment (CKA) has become a widely used tool for quantifying neural representation similarity. While current CKA estimators typically correct for the effects of finite stimuli…

Neurons and Cognition · Quantitative Biology 2025-02-26 Chanwoo Chun , Abdulkadir Canatar , SueYeon Chung , Daniel D. Lee

Background: In neurophysiological data, latency refers to a global shift of spikes from one spike train to the next, either caused by response onset fluctuations or by finite propagation speed. Such systematic shifts in spike timing lead to…

Spiking neural networks have gained significant attention due to their brain-like information processing capabilities. The use of surrogate gradients has made it possible to train spiking neural networks with backpropagation, leading to…

Neural and Evolutionary Computing · Computer Science 2023-05-24 Dongcheng Zhao , Guobin Shen , Yiting Dong , Yang Li , Yi Zeng

Fitting network models to neural activity is an important tool in neuroscience. A popular approach is to model a brain area with a probabilistic recurrent spiking network whose parameters maximize the likelihood of the recorded activity.…

Machine Learning · Statistics 2021-11-16 Guillaume Bellec , Shuqi Wang , Alireza Modirshanechi , Johanni Brea , Wulfram Gerstner

Decoding approaches are widely used in neuroscience and machine learning to compare stimulus representations across neural systems, such as different brain regions, organisms, and deep learning models. Popular methods include decoding…

Neurons and Cognition · Quantitative Biology 2026-05-08 Johannes Bertram , Luciano Dyballa , T. Anderson Keller , Savik Kinger , Steven W. Zucker

Comparing different neural network representations and determining how representations evolve over time remain challenging open questions in our understanding of the function of neural networks. Comparing representations in neural networks…

Machine Learning · Statistics 2018-10-25 Ari S. Morcos , Maithra Raghu , Samy Bengio

Neural population models, which predict the joint firing of many simultaneously recorded neurons forward in time, are typically evaluated by a single aggregate Pearson correlation $r$ between predicted and actual spike counts, a number that…

Activation-alignment measures such as Representational Similarity Analysis (RSA), Canonical Correlation Analysis (CCA), and Centered Kernel Alignment (CKA) are widely used to compare biological and artificial neural representations. Recent…

Machine Learning · Computer Science 2026-05-08 Amirhossein Yavari , Farnaz Zamani Esfahlani

Interpreting the internal reasoning of vision-language models is essential for deploying AI in safety-critical domains. Concept-based explainability provides a human-aligned lens by representing a model's behavior through semantically…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Ehud Gordon , Meir Yossef Levi , Guy Gilboa

Neural responses encode information that is useful for a variety of downstream tasks. A common approach to understand these systems is to build regression models or ``decoders'' that reconstruct features of the stimulus from neural…

Machine Learning · Statistics 2024-11-14 Sarah E. Harvey , David Lipshutz , Alex H. Williams

Class imbalance, where certain classes have insufficient data, poses a critical challenge for robust classification, often biasing models toward majority classes. Distribution calibration offers a promising avenue to address this by…

Machine Learning · Computer Science 2025-10-23 Priyobrata Mondal , Faizanuddin Ansari , Swagatam Das

Recent advances in neuroscience data acquisition allow for the simultaneous recording of large populations of neurons across multiple brain areas while subjects perform complex cognitive tasks. Interpreting these data requires us to index…

Neurons and Cognition · Quantitative Biology 2020-10-27 Yu Takagi , Steven W. Kennerley , Jun-ichiro Hirayama , Laurence T. Hunt

Over the brief time intervals available for processing retinal output, roughly 50 to 300 msec, the number of extra spikes generated by individual ganglion cells can be quite variable. Here, computer-generated spike trains were used to…

Neurons and Cognition · Quantitative Biology 2007-09-14 Garrett T. Kenyon

Spiking Neural Networks (SNNs) offer low-latency and energy-efficient decision-making on neuromorphic hardware by mimicking the event-driven dynamics of biological neurons. However, the discrete and non-differentiable nature of spikes leads…

Neural and Evolutionary Computing · Computer Science 2026-03-05 Zijie Xu , Xinyu Shi , Yiting Dong , Zihan Huang , Zhaofei Yu

Recent work has sought to understand the behavior of neural networks by comparing representations between layers and between different trained models. We examine methods for comparing neural network representations based on canonical…

Machine Learning · Computer Science 2019-07-22 Simon Kornblith , Mohammad Norouzi , Honglak Lee , Geoffrey Hinton

There is overwhelming evidence that cognition, perception, and action rely on feedback control. However, if and how neural population dynamics are amenable to different control strategies is poorly understood, in large part because machine…

Neurons and Cognition · Quantitative Biology 2024-08-13 Ankit Kumar , Loren M. Frank , Kristofer E. Bouchard
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