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The significant progress in constructing graph spanners that are sparse (small number of edges) or light (low total weight) has skipped spanners that are everywhere-sparse (small maximum degree). This disparity is in line with other network…

Data Structures and Algorithms · Computer Science 2012-05-02 Eden Chlamtac , Michael Dinitz , Robert Krauthgamer

Detection of a planted dense subgraph in a random graph is a fundamental statistical and computational problem that has been extensively studied in recent years. We study a hypergraph version of the problem. Let $G^r(n,p)$ denote the…

Data Structures and Algorithms · Computer Science 2023-04-18 Abhishek Dhawan , Cheng Mao , Alexander S. Wein

Nearest neighbour graphs are widely used to capture the geometry or topology of a dataset. One of the most common strategies to construct such a graph is based on selecting a fixed number k of nearest neighbours (kNN) for each point.…

Machine Learning · Statistics 2022-08-02 Tetsuya Matsumoto , Stephen Zhang , Geoffrey Schiebinger

We present algorithms for length-constrained maximum sum segment and maximum density segment problems, in particular, and the problem of finding length-constrained heaviest segments, in general, for a sequence of real numbers. Given a…

Computational Geometry · Computer Science 2015-03-19 Md. Shafiul Alam , Asish Mukhopadhyay

A primary challenge in metagenomics is reconstructing individual microbial genomes from the mixture of short fragments created by sequencing. Recent work leverages the sparsity of the assembly graph to find $r$-dominating sets which enable…

Data Structures and Algorithms · Computer Science 2023-01-24 Yosuke Mizutani , Annie Staker , Blair D. Sullivan

We initiate the study of approximation algorithms and computational barriers for constructing sparse $\alpha$-navigable graphs [IX23, DGM+24], a core primitive underlying recent advances in graph-based nearest neighbor search. Given an…

Data Structures and Algorithms · Computer Science 2025-07-21 Sanjeev Khanna , Ashwin Padaki , Erik Waingarten

Consider a weighted or unweighted k-nearest neighbor graph that has been built on n data points drawn randomly according to some density p on R^d. We study the convergence of the shortest path distance in such graphs as the sample size…

Machine Learning · Computer Science 2012-07-10 Morteza Alamgir , Ulrike von Luxburg

As one of the most fundamental tasks in graph theory, subgraph matching is a crucial task in many fields, ranging from information retrieval, computer vision, biology, chemistry and natural language processing. Yet subgraph matching problem…

Machine Learning · Computer Science 2022-09-19 Zixun Lan , Limin Yu , Linglong Yuan , Zili Wu , Qiang Niu , Fei Ma

We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…

Data Structures and Algorithms · Computer Science 2013-08-02 Taku Onodera , Kunihiko Sadakane , Tetsuo Shibuya

We propose a hybrid heuristic algorithm for solving the Heaviest k-Subgraph Problem in online social networks -- a combinatorial graph optimization problem central to many important applications in weighted social networks, including…

Social and Information Networks · Computer Science 2023-06-01 Ville P. Saarinen , Ted Hsuan Yun Chen , Mikko Kivelä

In the densest subgraph problem, given a weighted undirected graph $G(V,E,w)$, with non-negative edge weights, we are asked to find a subset of nodes $S\subseteq V$ that maximizes the degree density $w(S)/|S|$, where $w(S)$ is the sum of…

Social and Information Networks · Computer Science 2019-04-18 Charalampos E. Tsourakakis , Tianyi Chen , Naonori Kakimura , Jakub Pachocki

The (non-uniform) sparsest cut problem is the following graph-partitioning problem: given a "supply" graph, and demands on pairs of vertices, delete some subset of supply edges to minimize the ratio of the supply edges cut to the total…

Data Structures and Algorithms · Computer Science 2021-06-01 Vincent Cohen-Addad , Anupam Gupta , Philip N. Klein , Jason Li

Given a network $G=(V,E)$, where each node $v$ is associated with a vector $\boldsymbol{p}_v \in \mathbb{R}^d$ representing its opinion about $d$ different topics, how can we uncover subsets of nodes that not only exhibit exceptionally high…

Social and Information Networks · Computer Science 2024-12-17 Tianyi Chen , Atsushi Miyauchi , Charalampos E. Tsourakakis

We consider the problem of distributed learning, where a network of agents collectively aim to agree on a hypothesis that best explains a set of distributed observations of conditionally independent random processes. We propose a…

Optimization and Control · Mathematics 2017-04-12 Angelia Nedić , Alex Olshevsky , César A. Uribe

We give the first almost-linear time algorithm for computing the \emph{maximal $k$-edge-connected subgraphs} of an undirected unweighted graph for any constant $k$. More specifically, given an $n$-vertex $m$-edge graph $G=(V,E)$ and a…

Data Structures and Algorithms · Computer Science 2023-07-04 Thatchaphol Saranurak , Wuwei Yuan

Time series subsequence anomaly detection is an important task in a large variety of real-world applications ranging from health monitoring to AIOps, and is challenging due to the following reasons: 1) how to effectively learn complex…

Machine Learning · Computer Science 2024-11-27 Weiqi Chen , Zhiqiang Zhou , Qingsong Wen , Liang Sun

Large data applications rely on storing data in massive, sparse graphs with millions to trillions of nodes. Graph-based methods, such as node prediction, aim for computational efficiency regardless of graph size. Techniques like localized…

Data Structures and Algorithms · Computer Science 2025-07-08 Yushen Huang , Ertai Luo , Reza Babenezhad , Yifan Sun

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in…

Combinatorics · Mathematics 2023-06-06 Kai Siong Yow , Ningyi Liao , Siqiang Luo , Reynold Cheng , Chenhao Ma , Xiaolin Han

Let $G = (V,E,w)$ be a weighted undirected graph on $|V| = n$ vertices and $|E| = m$ edges, let $k \ge 1$ be any integer, and let $\epsilon < 1$ be any parameter. We present the following results on fast constructions of spanners with…

Data Structures and Algorithms · Computer Science 2021-08-03 Hung Le , Shay Solomon

Nearest neighbor search and k-nearest neighbor graph construction are two fundamental issues arise from many disciplines such as multimedia information retrieval, data-mining and machine learning. They become more and more imminent given…

Information Retrieval · Computer Science 2020-09-18 Wan-Lei Zhao , Hui Wang , Chong-Wah Ngo