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Cell monolayers and epithelial tissues display slow dynamics during the liquid-glass transitions, a phenomenon with direct relevance to embryogenesis, tumor metastases, and wound healing. In active cells, persistent motion and cell…

Soft Condensed Matter · Physics 2024-01-25 Meng-Yuan Li , Yan-Wei Li

We review the field-theoretic renormalization-group approach to critical properties of flat polymerized membranes. We start with a presentation of the flexural effective model that is entirely expressed in terms of a transverse (flexural)…

Statistical Mechanics · Physics 2025-09-15 Simon Metayer , Sofian Teber

Recently, continuum elasticity theory has been applied to explain the shape transition of icosahedral viral capsids - single-protein-thick crystalline shells - from spherical to buckled/faceted as their radius increases through a critical…

Biological Physics · Physics 2009-11-11 T. T. Nguyen , R. F. Bruinsma , W. M. Gelbart

We present a pedagogical review of the swelling thermodynamics and phase transitions of polymer gels. In particular, we discuss how features of the volume phase transition of the gel's osmotic equilibrium is analogous to other transitions…

Soft Condensed Matter · Physics 2019-06-13 Michael S. Dimitriyev , Ya-Wen Chang , Paul M. Goldbart , Alberto Fernández-Nieves

Motivated by recent studies of two-phase lipid vesicles possessing 2D solid domains integrated within a fluid bilayer phase, we study the shape equilibria of closed vesicles possessing a single planar, circular inclusion. While 2D solid…

Soft Condensed Matter · Physics 2024-04-16 Geunwoong Jeon , Justin Fagnoni , Hao Wan , Maria M. Santore , Gregory M. Grason

Using three-dimensional representation of confluent cell layers, we map the amorphous solid to fluid phase transition in active cell layers onto the two-dimensional (2D) site percolation universality class. Importantly, we unify two…

Soft Condensed Matter · Physics 2022-10-18 Siavash Monfared , Guruswami Ravichandran , Jose E. Andrade , Amin Doostmohammadi

We consider a prototypical "stretching plus bending" functional of an elastic shell. The shell is modeled as a d-dimensional Riemannian manifold endowed, in addition to the metric, with a reference second fundamental form. The shell is…

Differential Geometry · Mathematics 2022-06-07 Itai Alpern , Raz Kupferman , Cy Maor

A mesoscopic model of amorphous plasticity is discussed in the context of depinning models. After embedding in a d + 1 dimensional space, where the accumulated plastic strain lives along the additional dimension, the gradual plastic…

Soft Condensed Matter · Physics 2016-07-06 Botond Tyukodi , Sylvain Patinet , Stéphane Roux , Damien Vandembroucq

We report simulations of a continuum model for (apolar, flow aligning) active fluids in two dimensions. Both free and anchored boundary conditions are considered, at parallel confining walls that are either static or moving at fixed…

Soft Condensed Matter · Physics 2015-05-20 S. M. Fielding , D. Marenduzzo , M. E. Cates

The onset of rigidity in interacting liquids, as they undergo a transition to a disordered solid, is associated with a rearrangement of the low-frequency vibrational spectrum. In this letter, we derive scaling forms for the singular…

Soft Condensed Matter · Physics 2022-11-08 Danilo B. Liarte , Stephen J. Thornton , Eric Schwen , Itai Cohen , Debanjan Chowdhury , James P. Sethna

Solids are distinguished from fluids by their ability to resist shear. In traditional solids, the resistance to shear is associated with the emergence of broken translational symmetry as exhibited by a non-uniform density pattern. In this…

Soft Condensed Matter · Physics 2013-08-20 Sumantra Sarkar , Dapeng Bi , Jie Zhang , R. P. Behringer , Bulbul Chakraborty

Within the resistive magnetohydrodynamic model, high-Lundquist number reconnection layers are unstable to the plasmoid instability, leading to a turbulent evolution where the reconnection rate can be independent of the underlying…

Plasma Physics · Physics 2019-09-04 A. Stanier , W. Daughton , A. Le , X. Li , R. Bird

The equations of a planar elastica under pressure can be rewritten in a useful form by parametrising the variables in terms of the local orientation angle, $\theta$, instead of the arc length. This ``$\theta$-formulation'' lends itself to a…

Soft Condensed Matter · Physics 2023-07-25 Gregory Kozyreff , Emmanuel Siéfert , Basile Radisson , Fabian Brau

The mechanics of epithelial tissues, which is governed by forces generated in various cell domains, is often investigated using two-dimensional models that account for the apically-positioned actomyosin structures but neglect basolateral…

Soft Condensed Matter · Physics 2024-03-01 Jan Rozman , Matej Krajnc , Primož Ziherl

A system of hard rectangles of size $m\times mk$ on a square lattice undergoes three entropy driven phase transitions with increasing density for large enough aspect ratio $k$: first from a low density isotropic to an intermediate density…

Statistical Mechanics · Physics 2015-01-28 Joyjit Kundu , R. Rajesh

A first-order transition is numerically found in a spherical surface model with skeletons, which are linked to each other at junctions. The shape of the triangulated surfaces is maintained by skeletons, which have a one-dimensional bending…

Statistical Mechanics · Physics 2009-11-11 Hiroshi Koibuchi

The yielding transition of amorphous materials is studied with a two-dimensional Hamiltonian model that allows both shear and volume deformations. The model is investigated as a function of the relative value of the bulk modulus $B$ with…

Soft Condensed Matter · Physics 2022-01-05 E. A. Jagla

In this article we calculate the surface phase diagram of a two-dimensional hard-rod fluid confined between two hard lines. In a first stage we study the semi-infinite system consisting of an isotropic fluid in contact with a single hard…

Statistical Mechanics · Physics 2009-11-13 Yuri Martinez-Raton

We introduce a novel model, comprising self-avoiding surfaces and incorporating edges and tubules, that is designed to characterize the structural morphologies and transitions observed within the endoplasmic reticulum (ER). By employing…

Soft Condensed Matter · Physics 2024-04-09 Jaya Kumar Alageshan , Yashodhan Hatwalne , Rahul Pandit

Non-equilibrium and active effects in mesoscopic scale systems have heralded a new era of scientific inquiries, whether concerning meta-materials or biological systems such as bacteria and cellular components. At mesoscopic scales,…