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There will be a paradigm shift in chemical and biological research, to be enabled by autonomous, closed-loop, real-time self-directed decision-making experimentation. Spectrum-to-structure correlation, which is to elucidate molecular…

Chemical Physics · Physics 2026-01-21 Xinyu Lu , Hao Ma , Hui Li , Jia Li , Yi Rong , Yuqiang Li , Tong Zhu , Guokun Liu , Bin Ren

The integration of pathologic images and genomic data for survival analysis has gained increasing attention with advances in multimodal learning. However, current methods often ignore biological characteristics, such as heterogeneity and…

Computer Vision and Pattern Recognition · Computer Science 2025-03-28 Shuaiyu Zhang , Xun Lin , Rongxiang Zhang , Yu Bai , Yong Xu , Tao Tan , Xunbin Zheng , Zitong Yu

Recent advancements in computational chemistry have leveraged the power of trans-former-based language models, such as MoLFormer, pre-trained using a vast amount of simplified molecular-input line-entry system (SMILES) sequences, to…

Biomolecules · Quantitative Biology 2024-11-05 Tianhao Peng , Yuchen Li , Xuhong Li , Jiang Bian , Zeke Xie , Ning Sui , Shahid Mumtaz , Yanwu Xu , Linghe Kong , Haoyi Xiong

In sequential recommendation, multi-modal information (e.g., text or image) can provide a more comprehensive view of an item's profile. The optimal stage (early or late) to fuse modality features into item representations is still debated.…

Information Retrieval · Computer Science 2023-08-31 Hengchang Hu , Wei Guo , Yong Liu , Min-Yen Kan

Simulations of biological macromolecules play an important role in understanding the physical basis of a number of complex processes such as protein folding. Even with increasing computational power and evolution of specialized…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-18 Hyungro Lee , Heng Ma , Matteo Turilli , Debsindhu Bhowmik , Shantenu Jha , Arvind Ramanathan

Prediction of a molecule's 3D conformer ensemble from the molecular graph holds a key role in areas of cheminformatics and drug discovery. Existing generative models have several drawbacks including lack of modeling important molecular…

In line with recent advances in neural drug design and sensitivity prediction, we propose a novel architecture for interpretable prediction of anticancer compound sensitivity using a multimodal attention-based convolutional encoder. Our…

Multimodal MR image synthesis aims to generate missing modality images by effectively fusing and mapping from a subset of available MRI modalities. Most existing methods adopt an image-to-image translation paradigm, treating multiple…

Image and Video Processing · Electrical Eng. & Systems 2025-04-29 Tao Song , Yicheng Wu , Minhao Hu , Xiangde Luo , Linda Wei , Guotai Wang , Yi Guo , Feng Xu , Shaoting Zhang

Recent advances in molecular science have been propelled significantly by large language models (LLMs). However, their effectiveness is limited when relying solely on molecular sequences, which fail to capture the complex structures of…

Quantitative Methods · Quantitative Biology 2025-08-12 Jianting Tang , Yubo Wang , Haoyu Cao , Linli Xu

Accurately predicting gene expression from histopathology images offers a scalable and non-invasive approach to molecular profiling, with significant implications for precision medicine and computational pathology. However, existing methods…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Yaxuan Song , Jianan Fan , Hang Chang , Weidong Cai

This survey provides a comprehensive overview of recent advances in multimodal alignment and fusion within the field of machine learning, driven by the increasing availability and diversity of data modalities such as text, images, audio,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Songtao Li , Hao Tang

Multimodal dialogue emotion recognition captures emotional cues by fusing text, visual, and audio modalities. However, existing approaches still suffer from notable limitations in modeling emotional dependencies and learning multimodal…

Multimedia · Computer Science 2026-03-12 Yunsheng Wang , Yuntao Shou , Yilong Tan , Wei Ai , Tao Meng , Keqin Li

Multimodal emotion and intent recognition is essential for automated human-computer interaction, It aims to analyze users' speech, text, and visual information to predict their emotions or intent. One of the significant challenges is that…

Artificial Intelligence · Computer Science 2025-07-09 Wei Zhang , Juan Chen , Yanbo J. Wang , En Zhu , Xuan Yang , Yiduo Wang

Multi-modal fusion is increasingly being used for autonomous driving tasks, as different modalities provide unique information for feature extraction. However, the existing two-stream networks are only fused at a specific network layer,…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Yan Gong , Xinyu Zhang , Hao Liu , Xinmin Jiang , Zhiwei Li , Xin Gao , Lei Lin , Dafeng Jin , Jun Li , Huaping Liu

Unlike traditional Multimodal Class-Incremental Learning (MCIL) methods that focus only on vision and text, this paper explores MCIL across vision, audio and text modalities, addressing challenges in integrating complementary information…

Machine Learning · Computer Science 2025-06-13 Yukun Chen , Zihuan Qiu , Fanman Meng , Hongliang Li , Linfeng Xu , Qingbo Wu

We introduce a new graph diffusion model for small molecule generation, DMol, which outperforms the state-of-the-art DiGress model in terms of validity by roughly 1.5% across all benchmarking datasets while reducing the number of diffusion…

Machine Learning · Computer Science 2025-11-04 Peizhi Niu , Yu-Hsiang Wang , Vishal Rana , Chetan Rupakheti , Abhishek Pandey , Olgica Milenkovic

We propose infinite mixture prototypes to adaptively represent both simple and complex data distributions for few-shot learning. Our infinite mixture prototypes represent each class by a set of clusters, unlike existing prototypical methods…

Machine Learning · Computer Science 2019-02-13 Kelsey R. Allen , Evan Shelhamer , Hanul Shin , Joshua B. Tenenbaum

Molecular property prediction constitutes a cornerstone of drug discovery and materials science, necessitating models capable of disentangling complex structure-property relationships across diverse molecular modalities. Existing approaches…

Machine Learning · Computer Science 2026-03-24 Long Xu , Junping Guo , Jianbo Zhao , Jianbo Lu , Yuzhong Peng

Constructing appropriate representations of molecules lies at the core of numerous tasks such as material science, chemistry and drug designs. Recent researches abstract molecules as attributed graphs and employ graph neural networks (GNN)…

Machine Learning · Computer Science 2021-07-29 Jianwen Chen , Shuangjia Zheng , Ying Song , Jiahua Rao , Yuedong Yang

Recent advancements in multimodal pre-training models have significantly advanced computational pathology. However, current approaches predominantly rely on visual-language models, which may impose limitations from a molecular perspective…

Computer Vision and Pattern Recognition · Computer Science 2024-12-03 Minghao Han , Dingkang Yang , Jiabei Cheng , Xukun Zhang , Linhao Qu , Zizhi Chen , Lihua Zhang
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