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Sequence comparison is a widely used computational technique in modern molecular biology. In spite of the frequent use of sequence comparisons the important problem of assigning statistical significance to a given degree of similarity is…

Quantitative Methods · Quantitative Biology 2007-05-23 Ralf Bundschuh , Nicholas Chia

Given high-dimensional time series data (e.g., sensor data), how can we detect anomalous events, such as system faults and attacks? More challengingly, how can we do this in a way that captures complex inter-sensor relationships, and…

Machine Learning · Computer Science 2021-06-15 Ailin Deng , Bryan Hooi

Harnessing parallelism in seemingly sequential models is a central challenge for modern machine learning. Several approaches have been proposed for evaluating sequential processes in parallel using iterative fixed-point methods, like…

Many real-world multivariate time series are collected from a network of physical objects embedded with software, electronics, and sensors. The quasi-periodic signals generated by these objects often follow a similar repetitive and periodic…

Machine Learning · Computer Science 2025-06-23 Kai Yang , Shaoyu Dou , Pan Luo , Xin Wang , H. Vincent Poor

A wide range of data that appear in scientific experiments and simulations are multivariate or multifield in nature, consisting of multiple scalar fields. Topological feature search of such data aims to reveal important properties useful to…

Computational Geometry · Computer Science 2024-06-06 Tripti Agarwal , Amit Chattopadhyay , Vijay Natarajan

Forecasting stock returns is a challenging problem due to the highly stochastic nature of the market and the vast array of factors and events that can influence trading volume and prices. Nevertheless it has proven to be an attractive…

Statistical Finance · Quantitative Finance 2021-09-15 Rian Dolphin , Barry Smyth , Yang Xu , Ruihai Dong

Probabilistic forecasting of multivariate time series is essential for various downstream tasks. Most existing approaches rely on the sequences being uniformly spaced and aligned across all variables. However, real-world multivariate time…

Machine Learning · Computer Science 2025-02-18 Yijun Li , Cheuk Hang Leung , Qi Wu

Inspired by applications in sports where the skill of players or teams competing against each other varies over time, we propose a probabilistic model of pairwise-comparison outcomes that can capture a wide range of time dynamics. We…

Machine Learning · Statistics 2019-05-20 Lucas Maystre , Victor Kristof , Matthias Grossglauser

Extracting a proper dynamic network for modelling a time-dependent complex system is an important issue. Building a correct model is related to finding out critical time points where a system exhibits considerable change. In this work, we…

Social and Information Networks · Computer Science 2022-06-28 Günce Keziban Orman , Nadir Türe , Selim Balcisoy , Hasan Alp Boz

We study the problem of similarity detection by sequence alignment with gaps, using a recently established theoretical framework based on the morphology of alignment paths. Alignments of sequences without mutual correlations are found to…

Biological Physics · Physics 2009-09-25 Dirk Drasdo , Terence Hwa , Michael Lassig

Given a pattern x of length m and a text y of length n, both over an ordered alphabet, the order-preserving pattern matching problem consists in finding all substrings of the text with the same relative order as the pattern. It is an…

Data Structures and Algorithms · Computer Science 2015-01-19 Simone Faro , Oğuzhan Külekci

Given a dynamic network, where edges appear and disappear over time, we are interested in finding sets of edges that have similar temporal behavior and form a dense subgraph. Formally, we define the problem as the enumeration of the maximal…

Social and Information Networks · Computer Science 2021-03-02 Giulia Preti , Polina Rozenshtein , Aristides Gionis , Yannis Velegrakis

The availability of data sets with large numbers of variables is rapidly increasing. The effective application of Bayesian variable selection methods for regression with these data sets has proved difficult since available Markov chain…

Computation · Statistics 2019-05-08 Jim Griffin , Krys Latuszynski , Mark Steel

This paper investigates different methods and various neural network architectures applicable in the time series classification domain. The data is obtained from a fleet of gas sensors that measure and track quantities such as oxygen and…

Machine Learning · Computer Science 2023-07-06 Mohamed Abouelnaga , Julien Vitay , Aida Farahani

The problem of sequentially finding an independent and identically distributed (i.i.d.) sequence that is drawn from a probability distribution $f_1$ by searching over multiple sequences, some of which are drawn from $f_1$ and the others of…

Information Theory · Computer Science 2013-12-10 Jun Geng , Weiyu Xu , Lifeng Lai

Time series regression models are commonly used in time series analysis. However, in modern real-world applications, serially correlated data with an ultra-high dimension and fat tails are prevalent. This presents a challenge in developing…

Statistics Theory · Mathematics 2023-04-21 Linbo Liu , Danna Zhang

This paper is devoted to the problem of time parallelization of assimilation methods applying on unbounded time domain. In this way, we present a general procedure to couple the Luenberger observer with time parallelization algorithm. Our…

Optimization and Control · Mathematics 2022-12-06 Sebastián Riffo , Félix Kwok , Julien Salomon

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…

Data Structures and Algorithms · Computer Science 2020-04-14 Satoshi Kobayashi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

Continuous-time series is essential for different modern application areas, e.g. healthcare, automobile, energy, finance, Internet of things (IoT) and other related areas. Different application needs to process as well as analyse a massive…

Machine Learning · Computer Science 2024-09-17 Mansura Habiba , Barak A. Pearlmutter , Mehrdad Maleki

Today, very large amounts of data are produced and stored in all branches of society including science. Mining these data meaningfully has become a considerable challenge and is of the broadest possible interest. The size, both in numbers…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-11 Andreas Vitalis