English
Related papers

Related papers: Scalable Approximate Biclique Counting over Large …

200 papers

We give an efficient algorithm to generate a graph from a distribution $\epsilon$-close to $G(n,p)$, in the sense of total variation distance. In particular, if $p$ is represented with $O(\log n)$-bit accuracy, then, with high probability,…

Data Structures and Algorithms · Computer Science 2012-07-13 Antonio Blanca , Milena Mihail

Many common graph data mining tasks take the form of identifying dense subgraphs (e.g. clustering, clique-finding, etc). In biological applications, the natural model for these dense substructures is often a complete bipartite graph…

Data Structures and Algorithms · Computer Science 2019-01-28 Kyle Kloster , Blair D. Sullivan , Andrew van der Poel

Triangle counting is an important problem in graph mining. Clustering coefficients of vertices and the transitivity ratio of the graph are two metrics often used in complex network analysis. Furthermore, triangles have been used…

Data Structures and Algorithms · Computer Science 2009-06-30 Charalampos E. Tsourakakis , Mihail N. Kolountzakis , Gary L. Miller

The maximum clique problem is a well known NP-Hard problem with applications in data mining, network analysis, informatics, and many other areas. Although there exist several algorithms with acceptable runtimes for certain classes of…

Data Structures and Algorithms · Computer Science 2012-11-15 Bharath Pattabiraman , Md. Mostofa Ali Patwary , Assefaw H. Gebremedhin , Wei-keng Liao , Alok Choudhary

Finding cohesive subgraphs in a large graph has many important applications, such as community detection and biological network analysis. Clique is often a too strict cohesive structure since communities or biological modules rarely form as…

Data Structures and Algorithms · Computer Science 2024-06-11 Qihao Cheng , Da Yan , Tianhao Wu , Lyuheng Yuan , Ji Cheng , Zhongyi Huang , Yang Zhou

Subgraph counting aims to count the number of occurrences of a subgraph T (aka as a template) in a given graph G. The basic problem has found applications in diverse domains. The problem is known to be computationally challenging - the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-27 Langshi Chen , Bo Peng , Sabra Ossen , Anil Vullikanti , Madhav Marathe , Lei Jiang , Judy Qiu

We consider the problems of finding a maximum clique in a graph and finding a maximum-edge biclique in a bipartite graph. Both problems are NP-hard. We write both problems as matrix-rank minimization and then relax them using the nuclear…

Data Structures and Algorithms · Computer Science 2009-01-22 Brendan Ames , Stephen Vavasis

A spin system is a framework in which the vertices of a graph are assigned spins from a finite set. The interactions between neighbouring spins give rise to weights, so a spin assignment can also be viewed as a weighted graph homomorphism.…

Data Structures and Algorithms · Computer Science 2021-04-15 Andreas Galanis , Leslie Ann Goldberg , James Stewart

We consider the problem of counting motifs in bipartite affiliation networks, such as author-paper, user-product, and actor-movie relations. We focus on counting the number of occurrences of a "butterfly", a complete $2 \times 2$ biclique,…

Discrete Mathematics · Computer Science 2018-03-19 Seyed-Vahid Sanei-Mehri , Ahmet Erdem Sariyuce , Srikanta Tirthapura

The maximum clique problem is a well known NP-Hard problem with applications in data mining, network analysis, information retrieval and many other areas related to the World Wide Web. There exist several algorithms for the problem with…

Data Structures and Algorithms · Computer Science 2014-12-01 Bharath Pattabiraman , Md. Mostofa Ali Patwary , Assefaw H. Gebremedhin , Wei-keng Liao , Alok Choudhary

From social science to biology, numerous applications often rely on graphlets for intuitive and meaningful characterization of networks at both the global macro-level as well as the local micro-level. While graphlets have witnessed a…

Social and Information Networks · Computer Science 2016-02-17 Nesreen K. Ahmed , Jennifer Neville , Ryan A. Rossi , Nick Duffield , Theodore L. Willke

We develop sampling algorithms to fit Bayesian hierarchical models, the computational complexity of which scales linearly with the number of observations and the number of parameters in the model. We focus on crossed random effect and…

Computation · Statistics 2025-01-03 Omiros Papaspiliopoulos , Timothée Stumpf-Fétizon , Giacomo Zanella

Graph comparison is a fundamental operation in data mining and information retrieval. Due to the combinatorial nature of graphs, it is hard to balance the expressiveness of the similarity measure and its scalability. Spectral analysis…

Social and Information Networks · Computer Science 2020-03-04 Anton Tsitsulin , Marina Munkhoeva , Bryan Perozzi

Subgraph counting aims to count occurrences of a template T in a given network G(V, E). It is a powerful graph analysis tool and has found real-world applications in diverse domains. Scaling subgraph counting problems is known to be memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-06 Langshi Chen , Jiayu Li , Ariful Azad , Cenk Sahinalp , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

We design new polynomial-time algorithms for recovering planted cliques in the semi-random graph model introduced by Feige and Kilian 2001. The previous best algorithms for this model succeed if the planted clique has size at least…

Data Structures and Algorithms · Computer Science 2023-06-07 Rares-Darius Buhai , Pravesh K. Kothari , David Steurer

In a topological quantum computer, universality is achieved by braiding and quantum information is natively protected from small local errors. We address the problem of compiling single-qubit quantum operations into braid representations…

Quantum Physics · Physics 2015-06-17 Vadym Kliuchnikov , Alex Bocharov , Krysta M. Svore

This work considers the general task of estimating the sum of a bounded function over the edges of a graph, given neighborhood query access and where access to the entire network is prohibitively expensive. To estimate this sum, prior work…

Social and Information Networks · Computer Science 2021-04-09 Carlos H. C. Teixeira , Mayank Kakodkar , Vinícius Dias , Wagner Meira , Bruno Ribeiro

Bipartite Correlation clustering is the problem of generating a set of disjoint bi-cliques on a set of nodes while minimizing the symmetric difference to a bipartite input graph. The number or size of the output clusters is not constrained…

Data Structures and Algorithms · Computer Science 2010-12-15 Nir Ailon , Noa Avigdor-Elgrabli , Edo Liberty

Let $K$ be a set of $k$ positive integers. A biclique cover of type $K$ of a graph $G$ is a collection of complete bipartite subgraphs of $G$ such that for every edge $e$ of $G$, the number of bicliques need to cover $e$ is a member of $K$.…

Combinatorics · Mathematics 2013-01-22 Farokhlagha Moazami , Nasrin Soltankhah

There are three usual definitions of a maximum bipartite clique (biclique) in a bipartite graph\,: either maximizing the number of vertices, or of edges, or finding a maximum balanced biclique. The first problem can be solved in polynomial…

Discrete Mathematics · Computer Science 2025-10-07 Fabien de Montgolfier , Renaud Torfs