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Quantification of cardiac biomarkers from cine cardiovascular magnetic resonance (CMR) data using deep learning (DL) methods offers many advantages, such as increased accuracy and faster analysis. However, only a few studies have focused on…

Quantitative Methods · Quantitative Biology 2024-08-22 Dewmini Hasara Wickremasinghe , Yiyang Xu , Esther Puyol-Antón , Paul Aljabar , Reza Razavi , Andrew P. King

Cells are the fundamental unit of biological organization, and identifying them in imaging data - cell segmentation - is a critical task for various cellular imaging experiments. While deep learning methods have led to substantial progress…

Accurate segmentation of anatomical structures in the apical four-chamber (A4C) view of fetal echocardiography is essential for early diagnosis and prenatal evaluation of congenital heart disease (CHD). However, precise segmentation remains…

Image and Video Processing · Electrical Eng. & Systems 2025-06-11 Donglian Li , Hui Guo , Minglang Chen , Huizhen Chen , Jialing Chen , Bocheng Liang , Pengchen Liang , Ying Tan

Automatic segmentation of anatomical structures with convolutional neural networks (CNNs) constitutes a large portion of research in medical image analysis. The majority of CNN-based methods rely on an abundance of labeled data for proper…

Image and Video Processing · Electrical Eng. & Systems 2020-03-20 Cheryl Sital , Tom Brosch , Dominique Tio , Alexander Raaijmakers , Jürgen Weese

Automated segmentation of Cardiac Magnetic Resonance (CMR) plays a pivotal role in efficiently assessing cardiac function, offering rapid clinical evaluations that benefit both healthcare practitioners and patients. While recent research…

Image and Video Processing · Electrical Eng. & Systems 2024-06-14 Abdul Qayyum , Hao Xu , Brian P. Halliday , Cristobal Rodero , Christopher W. Lanyon , Richard D. Wilkinson , Steven Alexander Niederer

Machine learning in medical imaging during clinical routine is impaired by changes in scanner protocols, hardware, or policies resulting in a heterogeneous set of acquisition settings. When training a deep learning model on an initial…

Computer Vision and Pattern Recognition · Computer Science 2022-03-16 Matthias Perkonigg , Johannes Hofmanninger , Christian Herold , Helmut Prosch , Georg Langs

Precise image segmentation provides clinical study with instructive information. Despite the remarkable progress achieved in medical image segmentation, there is still an absence of a 3D foundation segmentation model that can segment a wide…

Computer Vision and Pattern Recognition · Computer Science 2025-02-13 Yuxin Du , Fan Bai , Tiejun Huang , Bo Zhao

Semantic segmentation is a fundamental task in medical image analysis and autonomous driving and has a problem with the high cost of annotating the labels required in training. To address this problem, semantic segmentation methods based on…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Nagito Saito , Shintaro Ito , Koichi Ito , Takafumi Aoki

Foundation models have rapidly evolved and have achieved significant accomplishments in computer vision tasks. Specifically, the prompt mechanism conveniently allows users to integrate image prior information into the model, making it…

Computer Vision and Pattern Recognition · Computer Science 2024-04-12 Handi Deng , Yucheng Zhou , Jiaxuan Xiang , Liujie Gu , Yan Luo , Hai Feng , Mingyuan Liu , Cheng Ma

We present our novel deep multi-task learning method for medical image segmentation. Existing multi-task methods demand ground truth annotations for both the primary and auxiliary tasks. Contrary to it, we propose to generate the…

Image and Video Processing · Electrical Eng. & Systems 2022-04-06 Binod Bhattarai , Ronast Subedi , Rebati Raman Gaire , Eduard Vazquez , Danail Stoyanov

The escalating global cancer burden underscores the critical need for precise diagnostic tools in oncology. This research employs deep learning to enhance lesion segmentation in PET/CT imaging, utilizing a dataset of 900 whole-body…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Jiayi Liu , Qiaoyi Xue , Youdan Feng , Tianming Xu , Kaixin Shen , Chuyun Shen , Yuhang Shi

Curating datasets for object segmentation is a difficult task. With the advent of large-scale pre-trained generative models, conditional image generation has been given a significant boost in result quality and ease of use. In this paper,…

Computer Vision and Pattern Recognition · Computer Science 2023-09-06 Mischa Dombrowski , Hadrien Reynaud , Matthew Baugh , Bernhard Kainz

The performance of deep learning-based methods strongly relies on the number of datasets used for training. Many efforts have been made to increase the data in the medical image analysis field. However, unlike photography images, it is hard…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 Pochuan Wang , Chen Shen , Holger R. Roth , Dong Yang , Daguang Xu , Masahiro Oda , Kazunari Misawa , Po-Ting Chen , Kao-Lang Liu , Wei-Chih Liao , Weichung Wang , Kensaku Mori

Deep neural networks for aerial image segmentation require large amounts of labeled data, but high-quality aerial datasets with precise annotations are scarce and costly to produce. To address this limitation, we propose a self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Rupert Polley , Sai Vignesh Abishek Deenadayalan , J. Marius Zöllner

This article discusses the opportunities, applications and future directions of large-scale pre-trained models, i.e., foundation models, for analyzing medical images. Medical foundation models have immense potential in solving a wide range…

Image and Video Processing · Electrical Eng. & Systems 2023-11-23 Shaoting Zhang , Dimitris Metaxas

Segmentation in medical imaging is an essential and often preliminary task in the image processing chain, driving numerous efforts towards the design of robust segmentation algorithms. Supervised learning methods achieve excellent…

Image and Video Processing · Electrical Eng. & Systems 2024-04-03 Pierre Rougé , Pierre-Henri Conze , Nicolas Passat , Odyssée Merveille

The segmentation of the abdominal aorta in non-contrast CT images is a non-trivial task for computer-assisted endovascular navigation, particularly in scenarios where contrast agents are unsuitable. While state-of-the-art deep learning…

Image and Video Processing · Electrical Eng. & Systems 2024-02-07 Qixiang Ma , Antoine Lucas , Adrien Kaladji , Pascal Haigron

Pre-training a recognition model with contrastive learning on a large dataset of unlabeled data has shown great potential to boost the performance of a downstream task, e.g., image classification. However, in domains such as medical…

Computer Vision and Pattern Recognition · Computer Science 2021-08-24 Jizong Peng , Ping Wang , Chrisitian Desrosiers , Marco Pedersoli

Accurate segmentation of multiple organs in Computed Tomography (CT) images plays a vital role in computer-aided diagnosis systems. While various supervised learning approaches have been proposed recently, these methods heavily depend on a…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Yongzhi Huang , Fengjun Xi , Liyun Tu , Jinxin Zhu , Haseeb Hassan , Liyilei Su , Yun Peng , Jingyu Li , Jun Ma , Bingding Huang

Segmentation of objects of interest is one of the central tasks in medical image analysis, which is indispensable for quantitative analysis. When developing machine-learning based methods for automated segmentation, manual annotations are…

Computer Vision and Pattern Recognition · Computer Science 2020-07-20 Hang Li , Dong Wei , Shilei Cao , Kai Ma , Liansheng Wang , Yefeng Zheng