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Identifying directed interactions between species from time series of their population densities has many uses in ecology. This key statistical task is equivalent to causal time series inference, which connects to the Granger causality (GC)…

Populations and Evolution · Quantitative Biology 2020-11-10 Frederic Barraquand , Coralie Picoche , Matteo Detto , Florian Hartig

Traditional machine learning and deep learning techniques rely on correlation-based learning, often failing to distinguish spurious associations from true causal relationships, which limits robustness, interpretability, and…

Machine Learning · Computer Science 2025-03-05 Emam Hossain , Muhammad Hasan Ferdous , Jianwu Wang , Aneesh Subramanian , Md Osman Gani

Convergent Cross Mapping (CCM) is a powerful method for detecting causality in coupled nonlinear dynamical systems, providing a model-free approach to capture dynamic causal interactions. Partial Cross Mapping (PCM) was introduced as an…

Machine Learning · Computer Science 2025-02-07 Elise Zhang , François Mirallès , Raphaël Rousseau-Rizzi , Arnaud Zinflou , Di Wu , Benoit Boulet

Convergent Cross-Mapping (CCM) is a technique for computing specific kinds of correlations between sets of times series. It was introduced by Sugihara et al. and is reported to be "a necessary condition for causation" capable of…

Data Analysis, Statistics and Probability · Physics 2014-12-02 James M. McCracken , Robert S. Weigel

Conventional machine learning and deep learning models typically rely on correlation-based learning, which often fails to distinguish genuine causal relationships from spurious associations, limiting their robustness, interpretability, and…

Machine Learning · Computer Science 2025-09-12 Emam Hossain , Md Osman Gani

Identifying the causal relationships between subjects or variables remains an important problem across various scientific fields. This is particularly important but challenging in complex systems, such as those involving human behavior,…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-03 Bo Pu , Lujie Duan , Nathaniel Osgood

Convergent Cross-Mapping (CCM) has shown high potential to perform causal inference in the absence of models. We assess the strengths and weaknesses of the method by varying coupling strength and noise levels in coupled logistic maps. We…

Chaotic Dynamics · Physics 2018-10-19 Dan Mønster , Riccardo Fusaroli , Kristian Tylén , Andreas Roepstorff , Jacob F. Sherson

Causal modeling offers a principled foundation for uncovering stable, invariant relationships in time-series data, thereby improving robustness and generalization under distribution shifts. Yet its potential is underutilized in…

Machine Learning · Computer Science 2025-10-20 Emam Hossain , Muhammad Hasan Ferdous , Devon Dunmire , Aneesh Subramanian , Md Osman Gani

Discovering causal relations from observational time series without making the stationary assumption is a significant challenge. In practice, this challenge is common in many areas, such as retail sales, transportation systems, and medical…

Machine Learning · Computer Science 2024-07-11 Shanyun Gao , Raghavendra Addanki , Tong Yu , Ryan A. Rossi , Murat Kocaoglu

Nowadays, the need for causal discovery is ubiquitous. A better understanding of not just the stochastic dependencies between parts of a system, but also the actual cause-effect relations, is essential for all parts of science. Thus, the…

Machine Learning · Computer Science 2024-12-10 Boris Lorbeer , Mustafa Mohsen

Linear structural causal models (SCMs) -- in which each observed variable is generated by a subset of the other observed variables as well as a subset of the exogenous sources -- are pervasive in causal inference and casual discovery.…

Machine Learning · Computer Science 2022-11-09 Yuqin Yang , Mohamed Nafea , AmirEmad Ghassami , Negar Kiyavash

Infectious diseases are notorious for their complex dynamics, which make it difficult to fit models to test hypotheses. Methods based on state-space reconstruction have been proposed to infer causal interactions in noisy, nonlinear…

Quantitative Methods · Quantitative Biology 2017-02-08 Sarah Cobey , Edward B. Baskerville

Understanding causal relationships within a system is crucial for uncovering its underlying mechanisms. Causal discovery methods, which facilitate the construction of such models from time-series data, hold the potential to significantly…

Machine Learning · Computer Science 2024-07-31 Zsigmond Benkő , Bálint Varga , Marcell Stippinger , Zoltán Somogyvári

Causal discovery with time series data remains a challenging yet increasingly important task across many scientific domains. Convergent cross mapping (CCM) and related methods have been proposed to study time series that are generated by…

Machine Learning · Computer Science 2025-06-25 Kurt Butler , Daniel Waxman , Petar M. Djurić

Causal discovery aims to extract qualitative causal knowledge in the form of causal graphs from data. Because causal ground truth is rarely known in the real world, simulated data plays a vital role in evaluating the performance of the…

Machine Learning · Computer Science 2025-12-17 Rebecca J. Herman , Jonas Wahl , Urmi Ninad , Jakob Runge

Climate models are essential to understand and project climate change, yet long-standing biases and uncertainties in their projections remain. This is largely associated with the representation of subgrid-scale processes, particularly…

Discovering causal relationships from time series data is significant in fields such as finance, climate science, and neuroscience. However, contemporary techniques rely on the simplifying assumption that data originates from the same…

Machine Learning · Computer Science 2024-06-25 Sumanth Varambally , Yi-An Ma , Rose Yu

Learning causal relationships from time series data is an important but challenging problem. Existing synthetic datasets often contain hidden artifacts that can be exploited by causal discovery methods, reducing their usefulness for…

Machine Learning · Computer Science 2026-03-23 Xiaoyu He , Petr Ryšavý , Jakub Mareček

The warming of the Arctic, also known as Arctic amplification, is led by several atmospheric and oceanic drivers. However, the details of its underlying thermodynamic causes are still unknown. Inferring the causal effects of atmospheric…

Artificial Intelligence · Computer Science 2023-09-27 Sahara Ali , Omar Faruque , Yiyi Huang , Md. Osman Gani , Aneesh Subramanian , Nicole-Jienne Shchlegel , Jianwu Wang

Causal models seek to unravel the cause-effect relationships among variables from observed data, as opposed to mere mappings among them, as traditional regression models do. This paper introduces a novel causal discovery algorithm designed…

Machine Learning · Computer Science 2024-10-03 Saeed Mohseni-Sehdeh , Walid Saad
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