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Graph Transformers excel in long-range dependency modeling, but generally require quadratic memory complexity in the number of nodes in an input graph, and hence have trouble scaling to large graphs. Sparse attention variants such as…

Machine Learning · Computer Science 2024-11-26 Hamed Shirzad , Honghao Lin , Balaji Venkatachalam , Ameya Velingker , David Woodruff , Danica Sutherland

Sparse matrix multiplication operators (i.e., SpMM and SDDMM) are widely used in deep learning and scientific computing. Modern accelerators are commonly equipped with Tensor Core Units (TCUs) and CUDA cores to accelerate sparse operators.…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-23 Jinliang Shi , Shigang Li , Youxuan Xu , Xueying Wang , Rongtian Fu , Zhi Ma , Tong Wu

Federated learning (FL) enables distribution of machine learning workloads from the cloud to resource-limited edge devices. Unfortunately, current deep networks remain not only too compute-heavy for inference and training on edge devices,…

Machine Learning · Computer Science 2021-12-21 Sameer Bibikar , Haris Vikalo , Zhangyang Wang , Xiaohan Chen

Deep neural networks (DNNs) have been proven to be effective in solving many real-life problems, but its high computation cost prohibits those models from being deployed to edge devices. Pruning, as a method to introduce zeros to model…

Machine Learning · Computer Science 2021-12-22 Fei Sun , Minghai Qin , Tianyun Zhang , Xiaolong Ma , Haoran Li , Junwen Luo , Zihao Zhao , Yen-Kuang Chen , Yuan Xie

Sparse Matrix-Matrix Multiplication (SpMM) is a fundamental computation in graph analytics, scientific simulation, and sparse deep learning workloads. However, the extreme irregularity of real-world sparse matrices prevents existing…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-11 Aiying Li , Jingwei Sun , Han Li , Wence Ji , Guangzhong Sun

General sparse matrix-matrix multiplication (SpGEMM) is a fundamental building block for numerous applications such as algebraic multigrid method (AMG), breadth first search and shortest path problem. Compared to other sparse BLAS routines,…

Mathematical Software · Computer Science 2015-09-15 Weifeng Liu , Brian Vinter

To respond to the need of efficient training and inference of deep neural networks, a plethora of domain-specific hardware architectures have been introduced, such as Google Tensor Processing Units and NVIDIA Tensor Cores. A common feature…

Data Structures and Algorithms · Computer Science 2020-07-10 Rezaul Chowdhury , Francesco Silvestri , Flavio Vella

The acceleration of sparse matrix computations on modern many-core processors, such as the graphics processing units (GPUs), has been recognized and studied over a decade. Significant performance enhancements have been achieved for many…

Mathematical Software · Computer Science 2017-10-16 Ruipeng Li

The impact of transformer networks is booming, yet, they come with significant computational complexity. It is therefore essential to understand how to optimally map and execute these networks on modern neural processor hardware. So far,…

Hardware Architecture · Computer Science 2024-06-17 Steven Colleman , Arne Symons , Victor J. B. Jung , Marian Verhelst

Exploiting sparsity enables hardware systems to run neural networks faster and more energy-efficiently. However, most prior sparsity-centric optimization techniques only accelerate the forward pass of neural networks and usually require an…

Machine Learning · Computer Science 2018-06-05 Maohua Zhu , Jason Clemons , Jeff Pool , Minsoo Rhu , Stephen W. Keckler , Yuan Xie

Graph Neural Networks (GNNs) are widely used to perform different machine learning tasks on graphs. As the size of the graphs grows, and the GNNs get deeper, training and inference time become costly in addition to the memory requirement.…

Machine Learning · Computer Science 2022-08-09 Md. Khaledur Rahman , Ariful Azad

We describe the Fast Greedy Sparse Subspace Clustering (FGSSC) algorithm providing an efficient method for clustering data belonging to a few low-dimensional linear or affine subspaces. The main difference of our algorithm from predecessors…

Machine Learning · Computer Science 2013-06-10 Alexander Petukhov , Inna Kozlov

Transformers' quadratic complexity with respect to the input sequence length has motivated a body of work on efficient sparse approximations to softmax. An alternative path, used by entmax transformers, consists of having built-in exact…

Computation and Language · Computer Science 2022-04-22 Marcos Treviso , António Góis , Patrick Fernandes , Erick Fonseca , André F. T. Martins

Overparameterized neural networks generalize well but are expensive to train. Ideally, one would like to reduce their computational cost while retaining their generalization benefits. Sparse model training is a simple and promising approach…

Machine Learning · Computer Science 2022-05-12 Tri Dao , Beidi Chen , Kaizhao Liang , Jiaming Yang , Zhao Song , Atri Rudra , Christopher Ré

Sparse attention offers a promising strategy to extend long-context capabilities in Transformer LLMs, yet its efficiency-accuracy trade-offs remain unclear due to the lack of comprehensive evaluation. We address this gap with the…

Computation and Language · Computer Science 2026-01-28 Piotr Nawrot , Robert Li , Renjie Huang , Sebastian Ruder , Kelly Marchisio , Edoardo M. Ponti

Traditional fluorescence staining is phototoxic to live cells, slow, and expensive; thus, the subcellular structure prediction (SSP) from transmitted light (TL) images is emerging as a label-free, faster, low-cost alternative. However,…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Jintu Zheng , Yi Ding , Qizhe Liu , Yi Cao , Ying Hu , Zenan Wang

The quadratic complexity of attention remains the central bottleneck in long-context inference for large language models. Prior acceleration methods either sparsify the attention map with structured patterns or permanently evict tokens at…

Computation and Language · Computer Science 2026-05-04 Dongwon Jo , Beomseok Kang , Jiwon Song , Jae-Joon Kim

Graph neural networks (GNNs) leverage the connectivity and structure of real-world graphs to learn intricate properties and relationships between nodes. Many real-world graphs exceed the memory capacity of a GPU due to their sheer size, and…

Machine Learning · Computer Science 2025-10-30 Aditya K. Ranjan , Siddharth Singh , Cunyang Wei , Abhinav Bhatele

LU factorization for sparse matrices is the most important computing step for many engineering and scientific computing problems such as circuit simulation. But parallelizing LU factorization with the Graphic Processing Units (GPU) still…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-14 Shaoyi Peng , Sheldon X. -D. Tan

General-purpose Sparse Matrix-Matrix Multiplication (SpMM) is a fundamental kernel in scientific computing and deep learning. The emergence of new matrix computation units such as Tensor Cores (TCs) brings more opportunities for SpMM…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-17 Haisha Zhao , San Li , Jiaheng Wang , Chunbao Zhou , Jue Wang , Zhikuang Xin , Shunde Li , Zhiqiang Liang , Zhijie Pan , Fang Liu , Yan Zeng , Yangang Wang , Xuebin Chi