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Learning a graph with a specific structure is essential for interpretability and identification of the relationships among data. It is well known that structured graph learning from observed samples is an NP-hard combinatorial problem. In…

Machine Learning · Statistics 2019-09-26 Sandeep Kumar , Jiaxi Ying , Jos'e Vin'icius de M. Cardoso , Daniel P. Palomar

We propose a novel method for constructing wavelet transforms of functions defined on the vertices of an arbitrary finite weighted graph. Our approach is based on defining scaling using the the graph analogue of the Fourier domain, namely…

Functional Analysis · Mathematics 2009-12-22 David K Hammond , Pierre Vandergheynst , Rémi Gribonval

Learning the graph Laplacian from observed data is one of the most investigated and fundamental tasks in Graph Signal Processing (GSP). Different variants of the Laplacian, such as the combinatorial, signless or signed Laplacians have been…

Signal Processing · Electrical Eng. & Systems 2026-04-02 Stefania Sardellitti

Spectral-based graph neural networks (SGNNs) have been attracting increasing attention in graph representation learning. However, existing SGNNs are limited in implementing graph filters with rigid transforms (e.g., graph Fourier or…

Machine Learning · Computer Science 2022-01-05 Mingxing Xu , Wenrui Dai , Chenglin Li , Junni Zou , Hongkai Xiong , Pascal Frossard

Capturing the long-range dependencies has empirically proven to be effective on a wide range of computer vision tasks. The progressive advances on this topic have been made through the employment of the transformer framework with the help…

Computer Vision and Pattern Recognition · Computer Science 2022-09-21 Dong Zhang , Jinhui Tang , Kwang-Ting Cheng

Discovering new materials better suited to specific purposes is an important issue in improving the quality of human life. Here, a neural network that creates molecules that meet some desired conditions based on a deep understanding of…

Machine Learning · Computer Science 2022-02-15 Hyunseung Kim , Jonggeol Na , Won Bo Lee

Separating multiple graph signals from a single observed mixture is an inherently ill-posed problem that traditionally relies on restrictive and handcrafted priors. This letter addresses this challenge by proposing an unsupervised learnable…

Signal Processing · Electrical Eng. & Systems 2026-04-28 Keivan Faghih Niresi , Dorina Thanou , Olga Fink

Fully connected Graph Transformers (GT) have rapidly become prominent in the static graph community as an alternative to Message-Passing models, which suffer from a lack of expressivity, oversquashing, and under-reaching. However, in a…

Machine Learning · Computer Science 2024-11-18 Yannis Karmim , Marc Lafon , Raphael Fournier S'niehotta , Nicolas Thome

We propose an innovative, learnable two-sided short-time Laplace transform (STLT) mechanism to supplant the traditional self attention in transformer-based LLMs. Our STLT introduces trainable parameters for each Laplace node, enabling…

Machine Learning · Computer Science 2025-06-23 Andrew Kiruluta

In recent years, the Transformer architecture has proven to be very successful in sequence processing, but its application to other data structures, such as graphs, has remained limited due to the difficulty of properly defining positions.…

Machine Learning · Computer Science 2021-10-28 Devin Kreuzer , Dominique Beaini , William L. Hamilton , Vincent Létourneau , Prudencio Tossou

Question Answering (QA) is a task that entails reasoning over natural language contexts, and many relevant works augment language models (LMs) with graph neural networks (GNNs) to encode the Knowledge Graph (KG) information. However, most…

Computation and Language · Computer Science 2023-04-26 Jinyoung Park , Hyeong Kyu Choi , Juyeon Ko , Hyeonjin Park , Ji-Hoon Kim , Jisu Jeong , Kyungmin Kim , Hyunwoo J. Kim

We argue that Transformers are essentially graph-to-graph models, with sequences just being a special case. Attention weights are functionally equivalent to graph edges. Our Graph-to-Graph Transformer architecture makes this ability…

Computation and Language · Computer Science 2023-10-30 James Henderson , Alireza Mohammadshahi , Andrei C. Coman , Lesly Miculicich

Existing Graph Neural Networks (GNNs) compute the message exchange between nodes by either aggregating uniformly (convolving) the features of all the neighboring nodes, or by applying a non-uniform score (attending) to the features. Recent…

Machine Learning · Computer Science 2023-03-02 Adrián Javaloy , Pablo Sanchez-Martin , Amit Levi , Isabel Valera

Graph Attention Network (GAT) is one of the most popular Graph Neural Network (GNN) architecture, which employs the attention mechanism to learn edge weights and has demonstrated promising performance in various applications. However, since…

Machine Learning · Computer Science 2024-03-05 Qincheng Lu , Jiaqi Zhu , Sitao Luan , Xiao-Wen Chang

Modeling long-range interactions, the propagation of information across distant parts of a graph, is a central challenge in graph machine learning. Graph wavelets, inspired by multi-resolution signal processing, provide a principled way to…

Machine Learning · Computer Science 2025-10-14 Filippo Guerranti , Fabrizio Forte , Simon Geisler , Stephan Günnemann

Prostate cancer grading from whole-slide images (WSIs) remains a challenging task due to the large-scale nature of WSIs, the presence of heterogeneous tissue structures, and difficulty of selecting diagnostically relevant regions. Existing…

Computer Vision and Pattern Recognition · Computer Science 2025-12-12 Masum Shah Junayed , John Derek Van Vessem , Qian Wan , Gahie Nam , Sheida Nabavi

Graph generation is a critical task in numerous domains, including molecular design and social network analysis, due to its ability to model complex relationships and structured data. While most modern graph generative models utilize…

Machine Learning · Computer Science 2025-06-04 Xiaohui Chen , Yinkai Wang , Jiaxing He , Yuanqi Du , Soha Hassoun , Xiaolin Xu , Li-Ping Liu

Neural machine translation (NMT) usually works in a seq2seq learning way by viewing either source or target sentence as a linear sequence of words, which can be regarded as a special case of graph, taking words in the sequence as nodes and…

Computation and Language · Computer Science 2020-09-17 Sufeng Duan , Hai Zhao , Rui Wang

Message Passing Neural Networks have recently become the most popular approach to graph machine learning tasks; however, their receptive field is limited by the number of message passing layers. To increase the receptive field, Graph…

Machine Learning · Computer Science 2026-04-10 Oleg Platonov , Liudmila Prokhorenkova

The Graph Fourier Transform (GFT) has recently demonstrated promising results in speech enhancement. However, existing GFT-based speech enhancement approaches often employ fixed graph topologies to build the graph Fourier basis, whose the…

Audio and Speech Processing · Electrical Eng. & Systems 2025-10-03 Tingting Wang , Tianrui Wang , Meng Ge , Qiquan Zhang , Xi Shao