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Related papers: Spatially Structured Flocking in a Proliferating P…

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We propose an extension to the ISM of flocking and swarming. The model has been introduced to explain certain dynamic features of swarming (second sound, a lower than expected dynamic critical exponent) while preserving the mechanism for…

Statistical Mechanics · Physics 2024-10-30 Sebastián Carruitero , Alejo Costa Duran , Giulia Pisegna , Mauricio B. Sturla , Tomás S. Grigera

Aerial displays of starlings (Sturnus vulgaris) at their communal roosts are complex: thousands of individuals form multiple flocks which are continually changing shape and density, while splitting and merging. To understand these complex…

Quantitative Methods · Quantitative Biology 2011-08-26 H. Hildenbrandt , C. Carere , C-K. Hemelrijk

The dynamic behavior of microtubules in solution can be strongly modified by interactions with walls or other structures. We examine here a microtubule growth model where the increase in size of the plus-end is perturbed by collisions with…

Soft Condensed Matter · Physics 2010-09-29 Vladimir A. Baulin , Carlos M. Marques , Fabrice Thalmann

We analyze an interacting particle system with a Markov evolution of birth-and-death type. We have shown that a local competition mechanism (realized via a density dependent mortality) leads to a globally regular behavior of the population…

Mathematical Physics · Physics 2015-01-27 Dmitri Finkelshtein , Yuri Kondratiev , Oleksandr Kutoviy

Mechanical interactions among cells in a growing microbial colony can significantly influence the colony's spatial genetic structure and, thus, evolutionary outcomes such as the fates of rare mutations. Here, we computationally investigate…

Soft Condensed Matter · Physics 2025-01-22 Mateusz Ratman , Jimmy Gonzalez Nuñez , Daniel A. Beller

In complex systems, groups of interacting objects may form prevalent and persistent spatiotemporal patterns, which we refer to as motifs. These motifs can exhibit features that reveal how individual objects interact with one another.…

Biological Physics · Physics 2025-12-12 Ying Chen Lim , Rakesh Das , Tetsuya Hiraiwa , N. Duane Loh

Over the last decade, significant progress has been made in understanding complex biological systems, however there have been few attempts at incorporating this knowledge into nature inspired optimization algorithms. In this paper, we…

Neural and Evolutionary Computing · Computer Science 2009-07-03 James M. Whitacre , Ruhul A. Sarker , Q. Tuan Pham

Segregation of populations is a key question in evolution theory. One important aspect is the relation between spatial organization and the population's composition. Here we study a specific example -- sectors in expanding bacterial…

Condensed Matter · Physics 2009-10-31 Ido Golding , Inon Cohen , Eshel Ben-Jacob

Animal groups frequently move in a highly organized manner, as represented by flocks of birds and schools of fish. Despite being an everyday occurrence, we do not yet fully understand how this works. What type of social interactions between…

Quantitative Methods · Quantitative Biology 2021-11-23 Daniel Strömbom , Tasnia Hassan , W. Hunter Greis , Alice Antia

Mutually repelling particles form spontaneously ordered clusters when forced into confinement. The clusters may adopt similar spatial arrangements even if the underlying particle interactions are contrastingly different. Here we demonstrate…

Soft Condensed Matter · Physics 2026-02-13 P. D. S. de Lima , R. De La Cour , K. Gaff , J. M. de Araújo , S. J. Cox , M. S. Ferreira , S. Hutzler

We present local distributed, stochastic algorithms for \emph{alignment} in self-organizing particle systems (SOPS) on two-dimensional lattices, where particles occupy unique sites on the lattice, and particles can make spatial moves to…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-15 Hridesh Kedia , Shunhao Oh , Dana Randall

In this paper we consider interacting particle systems which are frequently used to model collective behavior in animal swarms and other applications. We study the stability of orientationally aligned formations called flock solutions, one…

Dynamical Systems · Mathematics 2014-03-31 J. A. Carrillo , Y. Huang , S. Martin

We propose and investigate a simple model which describes the kinetics of aggregation of Brownian particles with stochastic self-replication. An exact solution and the scaling theory are presented alongside numerical simulation which fully…

Statistical Mechanics · Physics 2013-10-28 M. K. Hassan , M. Z. Hassan , N. Islam

Systems composed of strongly interacting self-propelled particles can form a spontaneously flowing polar active fluid. The study of the connection between the microscopic dynamics of a single such particle and the macroscopic dynamics of…

Soft Condensed Matter · Physics 2018-03-02 Benjamin Loewe , Anton Souslov , Paul M. Goldbart

Flocking is a prime example of how robust collective behavior can emerge from simple interaction rules. The flocking transition has been studied extensively since the inception of the original Vicsek model. Here, we introduce a novel…

Soft Condensed Matter · Physics 2024-09-18 Eloise Lardet , Raphaël Voituriez , Silvia Grigolon , Thibault Bertrand

We study the phase behavior of polar Active Brownian Particles moving in two-spatial dimensions and interacting through volume exclusion and velocity alignment. We combine particle-based simulations of the microscopic model with a simple…

Soft Condensed Matter · Physics 2018-12-26 Elena Sese-Sansa , Ignacio Pagonabarraga , Demian Levis

There are numerous scenarios in which populations of cells migrate in crowded environments. Typical examples include wound healing, cancer growth and embryo development. In these crowded environments cells are able to interact with each…

Cell Behavior · Quantitative Biology 2019-07-03 Christian A. Yates , George Chappelle

We show that dense active fluids comprising interacting particles with persistent self-propulsion are driven to a non-equilibrium steady state consisting of co-moving particles with co-aligned active forces. This velocity and force sorting…

Soft Condensed Matter · Physics 2025-09-03 Suman Dutta , Pinaki Chaudhuri , Madan Rao , Chandan Dasgupta

Microorganisms, such as E.Coli, are known to display upstream behavior and respond rheotactically to shear flows. In particular, E.Coli suspensions have been shown to display strong sensitivity to spatial constrictions, leading to an…

Soft Condensed Matter · Physics 2024-01-24 Armin Maleki , Malihe Ghodrat , Ignacio Pagonabarraga

Collective cell migration underlies important biological processes, such as embryonic development, wound healing and cancer invasion. While many aspects of single cell movements are now well established, the mechanisms leading to…