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In this paper, we propose enhanced feature based granular ball twin support vector machine (EF-GBTSVM). EF-GBTSVM employs the coarse granularity of granular balls (GBs) as input rather than individual data samples. The GBs are mapped to the…

Machine Learning · Computer Science 2025-02-11 A. Quadir , M. Sajid , M. Tanveer , P. N. Suganthan

Dimensionality reduction is crucial for analyzing large-scale single-cell RNA-seq data. Gaussian Process Latent Variable Models (GPLVMs) offer an interpretable dimensionality reduction method, but current scalable models lack effectiveness…

Machine Learning · Statistics 2024-05-08 Sarah Zhao , Aditya Ravuri , Vidhi Lalchand , Neil D. Lawrence

Stochastic First-Order (SFO) methods have been a cornerstone in addressing a broad spectrum of modern machine learning (ML) challenges. However, their efficacy is increasingly questioned, especially in large-scale applications where…

Machine Learning · Computer Science 2024-08-01 Di Zhang , Suvrajeet Sen

This paper presents an efficient variational inference framework for deriving a family of structured gaussian process regression network (SGPRN) models. The key idea is to incorporate auxiliary inducing variables in latent functions and…

Machine Learning · Computer Science 2021-11-19 Rui Meng , Herbie Lee , Kristofer Bouchard

Gradient Boosting Decision Tree (GBDT) are popular machine learning algorithms with implementations such as LightGBM and in popular machine learning toolkits like Scikit-Learn. Many implementations can only produce trees in an offline…

Machine Learning · Statistics 2020-02-06 Chapman Siu

The pharmaceutical Research and development (R&D) process is lengthy and costly, taking nearly a decade to bring a new drug to the market. However, advancements in biotechnology, computational methods, and machine learning algorithms have…

Biomolecules · Quantitative Biology 2024-01-24 Damilola Oshunyinka

With the help of a power-domain non-orthogonal multiple access (NOMA) scheme, satellite networks can simultaneously serve multiple users within limited time/spectrum resource block. However, the existence of channel estimation errors…

Signal Processing · Electrical Eng. & Systems 2020-02-04 Xiaojuan Yan , Kang An , Cheng-Xiang Wang , Wei-Ping Zhu , Yusheng Li , Zhiqiang Feng

In sequence learning tasks such as language modelling, Recurrent Neural Networks must learn relationships between input features separated by time. State of the art models such as LSTM and Transformer are trained by backpropagation of…

Machine Learning · Computer Science 2019-12-04 Jeremy Gordon , David Rawlinson , Subutai Ahmad

A new smoothing method for solving ? -support vector regression (?-SVR), tolerating a small error in fitting a given data sets nonlinearly is proposed in this study. Which is a smooth unconstrained optimization reformulation of the…

Computational Engineering, Finance, and Science · Computer Science 2013-12-13 Doreswamy , Chanabasayya M. Vastrad

Major depressive disorder (MDD) requires study of brain functional connectivity alterations for patients, which can be uncovered by resting-state functional magnetic resonance imaging (rs-fMRI) data. We consider the problem of identifying…

Machine Learning · Statistics 2022-06-10 Shuai Liu , Yixuan Qiu , Baojuan Li , Huaning Wang , Xiangyu Chang

Tandem mass spectrometry (MS/MS) is a high-throughput technology used toidentify the proteins in a complex biological sample, such as a drop of blood. A collection of spectra is generated at the output of the process, each spectrum of which…

Quantitative Methods · Quantitative Biology 2019-09-06 John T. Halloran , David M. Rocke

Burnout is a psychological syndrome marked by emotional exhaustion, depersonalization, and reduced personal accomplishment, with a significant impact on individual well-being and organizational performance. This study proposes a machine…

Machine Learning · Computer Science 2025-10-30 Bruno W. G. Teodosio , Mário J. O. T. Lira , Pedro H. M. Araújo , Lucas R. C. Farias

Deep neural networks (DNN) have been used successfully in many scientific problems for their high prediction accuracy, but their application to genetic studies remains challenging due to their poor interpretability. In this paper, we…

Machine Learning · Computer Science 2021-10-01 Peyman H. Kassani , Fred Lu , Yann Le Guen , Zihuai He

Deep neural networks (DNNs) have achieved remarkable success in computer vision; however, training DNNs for satisfactory performance remains challenging and suffers from sensitivity to empirical selections of an optimization algorithm for…

Computer Vision and Pattern Recognition · Computer Science 2020-12-22 Haichao Zhang , Kuangrong Hao , Lei Gao , Bing Wei , Xuesong Tang

Advances in statistical learning theory present the opportunity to develop statistical models of quantum many-body systems exhibiting remarkable predictive power. The potential of such ``theory-thin'' approaches is illustrated with the…

Nuclear Theory · Physics 2008-11-26 John W. Clark , Haochen Li

Advances in computational pathology increasingly rely on extracting meaningful representations from Whole Slide Images (WSIs) to support various clinical and biological tasks. In this study, we propose a generalizable deep learning…

Computer Vision and Pattern Recognition · Computer Science 2025-09-26 Shakib Khan , Fariba Dambandkhameneh , Nazim Shaikh , Yao Nie , Raghavan Venugopal , Xiao Li

The emerging research shows that lncRNAs are associated with a series of complex human diseases. However, most of the existing methods have limitations in identifying nonlinear lncRNA-disease associations (LDAs), and it remains a huge…

Machine Learning · Computer Science 2024-05-07 Jin-Xing Liu , Wen-Yu Xi , Ling-Yun Dai , Chun-Hou Zheng , Ying-Lian Gao

Stochastic gradient descent based algorithms are typically used as the general optimization tools for most deep learning models. A Restricted Boltzmann Machine (RBM) is a probabilistic generative model that can be stacked to construct deep…

Machine Learning · Statistics 2017-04-07 Kai Fan

Stochastic Boolean networks, or more generally, stochastic discrete networks, are an important class of computational models for molecular interaction networks. The stochasticity stems from the updating schedule. Standard updating schedules…

Molecular Networks · Quantitative Biology 2024-07-09 David Murrugarra , Jacob Miller , Alex Mueller

Importance: We introduce a novel Retrieval Augmented Generation (RAG)-Large Language Model (LLM) framework as a Clinical Decision Support Systems (CDSS) to support safe medication prescription. Objective: To evaluate the efficacy of…