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Fast data acquisition in Magnetic Resonance Imaging (MRI) is vastly in demand and scan time directly depends on the number of acquired k-space samples. Recently, the deep learning-based MRI reconstruction techniques were suggested to…

Computer Vision and Pattern Recognition · Computer Science 2019-03-20 Ali Pour Yazdanpanah , Onur Afacan , Simon K. Warfield

In this article, we propose a novel regularization method for a class of nonlinear inverse problems that is inspired by an application in quantitative magnetic resonance imaging (qMRI). The latter is a special instance of a general…

Optimization and Control · Mathematics 2025-06-16 Guozhi Dong , Michael Hintermüller , Clemens Sirotenko

A major interest in longitudinal neuroimaging studies involves investigating voxel-level neuroplasticity due to treatment and other factors across visits. However, traditional voxel-wise methods are beset with several pitfalls, which can…

Neurons and Cognition · Quantitative Biology 2023-10-19 Suprateek Kundu , Alec Reinhardt , Serena Song , Joo Han , M. Lawson Meadows , Bruce Crosson , Venkatagiri Krishnamurthy

Volumetric data compression is critical in fields like medical imaging, scientific simulation, and entertainment. We introduce a structure-free neural compression method combining Fourierfeature encoding with selective voxel sampling,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-13 Leona Žůrková , Petr Strakoš , Michal Kravčenko , Tomáš Brzobohatý , Lubomír Říha

Low-light image enhancement is a classical computer vision problem aiming to recover normal-exposure images from low-light images. However, convolutional neural networks commonly used in this field are good at sampling low-frequency local…

Computer Vision and Pattern Recognition · Computer Science 2022-09-19 Yunliang Zhuang , Zhuoran Zheng , Chen Lyu

Gaussian process modulated Poisson processes provide a flexible framework for modelling spatiotemporal point patterns. So far this had been restricted to one dimension, binning to a pre-determined grid, or small data sets of up to a few…

Machine Learning · Statistics 2018-04-04 S. T. John , James Hensman

This paper demonstrates a self-supervised framework for learning voxel-wise coarse-to-fine representations tailored for dense downstream tasks. Our approach stems from the observation that existing methods for hierarchical representation…

Computer Vision and Pattern Recognition · Computer Science 2024-05-28 Eytan Kats , Jochen G. Hirsch , Mattias P. Heinrich

Motivation: High acceleration factors place a limit on MRI image reconstruction. This limit is extended to segmentation models when treating these as subsequent independent processes. Goal: Our goal is to produce segmentations directly from…

Image and Video Processing · Electrical Eng. & Systems 2025-11-07 Yundi Zhang , Nil Stolt-Ansó , Jiazhen Pan , Wenqi Huang , Kerstin Hammernik , Daniel Rueckert

Decreasing magnetic resonance (MR) image acquisition times can potentially make MR examinations more accessible. Prior arts including the deep learning models have been devoted to solving the problem of long MRI imaging time. Recently, deep…

Image and Video Processing · Electrical Eng. & Systems 2022-08-23 Zongjiang Tu , Chen Jiang , Yu Guan , Shanshan Wang , Jijun Liu , Qiegen Liu , Dong Liang

Unsupervised image registration commonly adopts U-Net style networks to predict dense displacement fields in the full-resolution spatial domain. For high-resolution volumetric image data, this process is however resource-intensive and…

Computer Vision and Pattern Recognition · Computer Science 2023-07-07 Xi Jia , Joseph Bartlett , Wei Chen , Siyang Song , Tianyang Zhang , Xinxing Cheng , Wenqi Lu , Zhaowen Qiu , Jinming Duan

Applications such as Magnetic Resonance Tomography acquire imaging data by point samples of their Fourier transform. This raises the question of balancing the efficiency of the sampling strategies with the approximation accuracy of an…

Numerical Analysis · Mathematics 2015-10-20 Gitta Kutyniok , Wang-Q Lim

Automatic 3D neuron reconstruction is critical for analysing the morphology and functionality of neurons in brain circuit activities. However, the performance of existing tracing algorithms is hinged by the low image quality. Recently, a…

Image and Video Processing · Electrical Eng. & Systems 2021-09-17 Heng Wang , Chaoyi Zhang , Jianhui Yu , Yang Song , Siqi Liu , Wojciech Chrzanowski , Weidong Cai

Score-based diffusion models in infinite-dimensional function spaces provide a mathematically principled framework for modelling function-valued data, offering key advantages such as resolution invariance and the ability to handle irregular…

Machine Learning · Computer Science 2026-05-06 James Rowbottom , Elizabeth L. Baker , Nick Huang , Ben Adcock , Carola-Bibiane Schönlieb , Alexander Denker

We present a framework for accelerated iterative reconstructions using a fast and approximate forward model that is based on k-space methods for photoacoustic tomography. The approximate model introduces aliasing artefacts in the gradient…

Computer Vision and Pattern Recognition · Computer Science 2020-09-07 Andreas Hauptmann , Ben Cox , Felix Lucka , Nam Huynh , Marta Betcke , Paul Beard , Simon Arridge

This dissertation is devoted to provide advanced nonconvex nonsmooth variational models of (Magnetic Resonance Image) MRI reconstruction, efficient learnable image reconstruction algorithms and parameter training algorithms that improve the…

Optimization and Control · Mathematics 2023-03-06 Wanyu Bian

Purpose: A fast data-driven optimization approach, named bias-accelerated subset selection (BASS), is proposed for learning efficacious sampling patterns (SPs) with the purpose of reducing scan time in large-dimensional parallel MRI.…

Signal Processing · Electrical Eng. & Systems 2020-11-05 Marcelo V. W. Zibetti , Gabor T. Herman , Ravinder R. Regatte

Fluorescent materials are characterized by a spectral reradiation toward longer wavelengths. Recent work [Fichet et al. 2024] has shown that the rendering of fluorescence in a non-spectral engine is possible through the use of appropriate…

Graphics · Computer Science 2025-05-27 Belcour Laurent , Fichet Alban , Barla Pascal

Dynamic magnetic resonance imaging (MRI) exhibits high correlations in k-space and time. In order to accelerate the dynamic MR imaging and to exploit k-t correlations from highly undersampled data, here we propose a novel deep learning…

Image and Video Processing · Electrical Eng. & Systems 2019-07-23 Chen Qin , Jo Schlemper , Jinming Duan , Gavin Seegoolam , Anthony Price , Joseph Hajnal , Daniel Rueckert

In this paper we study a variational problem in the space of functions of bounded Hessian. Our model constitutes a straightforward higher-order extension of the well known ROF functional (total variation minimisation) to which we add a…

Numerical Analysis · Mathematics 2013-08-09 Konstantinos Papafitsoros , Carola-Bibiane Schönlieb

In Fourier ptychography, multiple low resolution images are captured and subsequently combined computationally into a high-resolution, large-field of view micrograph. A theoretical image-formation model based on the assumption of plane-wave…

Optics · Physics 2022-06-22 Tomas Aidukas , Lars Loetgering , Andrew Robert Harvey