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While AI systems have made remarkable progress in processing unstructured text, structured data such as graphs stored in databases, continues to grow rapidly yet remains difficult for neural models to effectively utilize. We introduce…

Databases · Computer Science 2026-03-09 Yufei Li , Yisen Gao , Jiaxin Bai , Jiaxuan Xiong , Haoyu Huang , Zhongwei Xie , Hong Ting Tsang , Yangqiu Song

Graph Neural Networks (GNNs) have made significant advances on several fundamental inference tasks. As a result, there is a surge of interest in using these models for making potentially important decisions in high-regret applications.…

Machine Learning · Computer Science 2020-02-26 Kaidi Xu , Sijia Liu , Pin-Yu Chen , Mengshu Sun , Caiwen Ding , Bhavya Kailkhura , Xue Lin

Graph foundation models (GFMs) have recently gained significant attention. However, the unique data processing and evaluation setups employed by different studies hinder a deeper understanding of their progress. Additionally, current…

Data mixing strategies have successfully reduced the costs involved in training language models. While promising, such methods suffer from two flaws. First, they rely on predetermined data domains (e.g., data sources, task types), which may…

Reasoning over visual relationships-spatial, functional, interactional, social, etc.-is considered to be a fundamental component of human cognition. Yet, despite the major advances in visual comprehension in multimodal language models…

Computer Vision and Pattern Recognition · Computer Science 2025-06-10 Jae Sung Park , Zixian Ma , Linjie Li , Chenhao Zheng , Cheng-Yu Hsieh , Ximing Lu , Khyathi Chandu , Quan Kong , Norimasa Kobori , Ali Farhadi , Yejin Choi , Ranjay Krishna

Graph Convolutional Networks (GCNs) have received increasing attention in the machine learning community for effectively leveraging both the content features of nodes and the linkage patterns across graphs in various applications. As…

Machine Learning · Computer Science 2021-01-01 Donghan Yu , Ruohong Zhang , Zhengbao Jiang , Yuexin Wu , Yiming Yang

Complex networks are relational data sets commonly represented as graphs. The analysis of their intricate structure is relevant to many areas of science and commerce, and data sets may reach sizes that require distributed storage and…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-01-05 Jannis Koch , Christian L. Staudt , Maximilian Vogel , Henning Meyerhenke

Relational databases (RDBs) play a crucial role in many real-world web applications, supporting data management across multiple interconnected tables. Beyond typical retrieval-oriented tasks, prediction tasks on RDBs have recently gained…

Artificial Intelligence · Computer Science 2026-01-27 Kyungho Kim , Geon Lee , Juyeon Kim , Dongwon Choi , Shinhwan Kang , Kijung Shin

We report a flexible language-model based deep learning strategy, applied here to solve complex forward and inverse problems in protein modeling, based on an attention neural network that integrates transformer and graph convolutional…

Biomolecules · Quantitative Biology 2023-10-20 Markus J. Buehler

In-context learning is the ability of a pretrained model to adapt to novel and diverse downstream tasks by conditioning on prompt examples, without optimizing any parameters. While large language models have demonstrated this ability, how…

Machine Learning · Computer Science 2023-05-23 Qian Huang , Hongyu Ren , Peng Chen , Gregor Kržmanc , Daniel Zeng , Percy Liang , Jure Leskovec

Deep neural networks have enabled researchers to create powerful generalized frameworks, such as transformers, that can be used to solve well-studied problems in various application domains, such as text and image. However, such generalized…

Machine Learning · Computer Science 2025-02-12 Rudrajit Dawn , Madhusudan Ghosh , Partha Basuchowdhuri , Sudip Kumar Naskar

Link Prediction (LP) is a critical task in graph machine learning. While Graph Neural Networks (GNNs) have significantly advanced LP performance recently, existing methods face key challenges including limited supervision from sparse…

Machine Learning · Computer Science 2025-08-07 Yu Song , Zhigang Hua , Harry Shomer , Yan Xie , Jingzhe Liu , Bo Long , Hui Liu

Graph neural networks (GNNs) are conventionally trained on a per-domain, per-task basis. It creates a significant barrier in transferring the acquired knowledge to different, heterogeneous data setups. This paper introduces GraphBridge, a…

Machine Learning · Computer Science 2025-03-04 Li Ju , Xingyi Yang , Qi Li , Xinchao Wang

Networks are a powerful tool to model complex systems, and the definition of many Graph Neural Networks (GNN), Deep Learning algorithms that can handle networks, has opened a new way to approach many real-world problems that would be hardly…

Machine Learning · Computer Science 2021-09-28 Marco Grassia , Manlio De Domenico , Giuseppe Mangioni

Graph neural networks are recognized for their strong performance across various applications, with the backpropagation algorithm playing a central role in the development of most GNN models. However, despite its effectiveness, BP has…

Machine Learning · Computer Science 2024-11-06 Gongpei Zhao , Tao Wang , Congyan Lang , Yi Jin , Yidong Li , Haibin Ling

In recent years, the attention mechanism has demonstrated superior performance in various tasks, leading to the emergence of GAT and Graph Transformer models that utilize this mechanism to extract relational information from…

Machine Learning · Computer Science 2023-01-31 Ahmet Sarıgün

Skeleton-based action recognition has attracted considerable attention in computer vision since skeleton data is more robust to the dynamic circumstance and complicated background than other modalities. Recently, many researchers have used…

Computer Vision and Pattern Recognition · Computer Science 2020-03-18 Hao Yang , Dan Yan , Li Zhang , Dong Li , YunDa Sun , ShaoDi You , Stephen J. Maybank

Graph foundation models using graph neural networks promise sustainable, efficient atomistic modeling. To tackle challenges of processing multi-source, multi-fidelity data during pre-training, recent studies employ multi-task learning, in…

Graph neural networks (GNNs) are widely used for modelling graph-structured data in numerous applications. However, with their inherently finite aggregation layers, existing GNN models may not be able to effectively capture long-range…

Machine Learning · Computer Science 2022-02-23 Juncheng Liu , Kenji Kawaguchi , Bryan Hooi , Yiwei Wang , Xiaokui Xiao

The ability of the foundation models heavily relies on large-scale, diverse, and high-quality pretraining data. In order to improve data quality, researchers and practitioners often have to manually curate datasets from difference sources…

Machine Learning · Computer Science 2024-04-24 Yiding Sun , Feng Wang , Yutao Zhu , Wayne Xin Zhao , Jiaxin Mao