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Effective representation of brain anatomical architecture is fundamental in understanding brain regularity and variability. Despite numerous efforts, it is still difficult to infer reliable anatomical correspondence at finer scale, given…

Neurons and Cognition · Quantitative Biology 2022-05-30 Lu Zhang , Xiaowei Yu , Yanjun Lyu , Zhengwang Wu , Haixing Dai , Lin Zhao , Li Wang , Gang Li , Tianming Liu , Dajiang Zhu

Clinical adoption of personalized virtual heart simulations faces challenges in model personalization and expensive computation. While an ideal solution is an efficient neural surrogate that at the same time is personalized to an individual…

Machine Learning · Computer Science 2022-10-07 Xiajun Jiang , Zhiyuan Li , Ryan Missel , Md Shakil Zaman , Brian Zenger , Wilson W. Good , Rob S. MacLeod , John L. Sapp , Linwei Wang

The lack of transparency of Deep Neural Networks continues to be a limitation that severely undermines their reliability and usage in high-stakes applications. Promising approaches to overcome such limitations are Prototype-Based…

Machine Learning · Computer Science 2025-07-21 Jon Vadillo , Roberto Santana , Jose A. Lozano , Marta Kwiatkowska

A steadily increasing body of evidence suggests that the brain performs probabilistic inference to interpret and respond to sensory input and that trial-to-trial variability in neural activity plays an important role. The neural sampling…

Neurons and Cognition · Quantitative Biology 2017-07-07 Ilja Bytschok , Dominik Dold , Johannes Schemmel , Karlheinz Meier , Mihai A. Petrovici

Most methods tackle zero-shot video classification by aligning visual-semantic representations within seen classes, which limits generalization to unseen classes. To enhance model generalizability, this paper presents an end-to-end…

Computer Vision and Pattern Recognition · Computer Science 2022-03-30 Shi Pu , Kaili Zhao , Mao Zheng

It has been proposed that populations of neurons process information in terms of probability density functions (PDFs) of analog variables. Such analog variables range, for example, from target luminance and depth on the sensory interface to…

Disordered Systems and Neural Networks · Physics 2007-05-23 M. J. Barber , J. W. Clark , C. H. Anderson

The Allen Brain Atlas (ABA) of the adult mouse consists of digitized expression profiles of thousands of genes in the mouse brain, co-registered to a common three-dimensional template (the Allen Reference Atlas). This brain-wide,…

Neurons and Cognition · Quantitative Biology 2015-10-28 Pascal Grange

Representational straightening refers to a decrease in curvature of visual feature representations of a sequence of frames taken from natural movies. Prior work established straightening in neural representations of the primate primary…

Neurons and Cognition · Quantitative Biology 2023-08-29 Tahereh Toosi , Elias B. Issa

The need for more transparency of the decision-making processes in artificial neural networks steadily increases driven by their applications in safety critical and ethically challenging domains such as autonomous driving or medical…

Neural and Evolutionary Computing · Computer Science 2020-05-12 Richard Meyes , Constantin Waubert de Puiseau , Andres Posada-Moreno , Tobias Meisen

Neurons in the input layer of primary visual cortex in primates develop edge-like receptive fields. One approach to understanding the emergence of this response is to state that neural activity has to efficiently represent sensory data with…

Neurons and Cognition · Quantitative Biology 2016-12-09 Laurent Perrinet

There is still much to understand about the color processing mechanisms in the brain and the transformation from cone-opponent representations to perceptual hues. Moreover, it is unclear which areas(s) in the brain represent unique hues. We…

Neurons and Cognition · Quantitative Biology 2019-07-05 Paria Mehrani , Andrei Mouraviev , John K. Tsotsos

Uniquely among primates, humans possess a remarkable capacity to recognize and manipulate abstract structure in the service of task goals across a broad range of behaviors. One illustration of this is in the visual perception of geometric…

Neurons and Cognition · Quantitative Biology 2023-10-02 Declan Campbell , Sreejan Kumar , Tyler Giallanza , Jonathan D. Cohen , Thomas L. Griffiths

A key requirement for the development of effective learning representations is their evaluation and comparison to representations we know to be effective. In natural sensory domains, the community has viewed the brain as a source of…

Neural and Evolutionary Computing · Computer Science 2013-01-28 Charles F. Cadieu , Ha Hong , Dan Yamins , Nicolas Pinto , Najib J. Majaj , James J. DiCarlo

Deep neural networks have achieved success across a wide range of applications, including as models of human behavior and neural representations in vision tasks. However, neural network training and human learning differ in fundamental…

Computer Vision and Pattern Recognition · Computer Science 2025-09-04 Lukas Muttenthaler , Klaus Greff , Frieda Born , Bernhard Spitzer , Simon Kornblith , Michael C. Mozer , Klaus-Robert Müller , Thomas Unterthiner , Andrew K. Lampinen

We propose the Neural Functional Alignment Space (NFAS), a brain-referenced representational framework for characterizing artificial neural networks on equal functional grounds. NFAS departs from conventional alignment approaches that rely…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Ruiyu Yan , Hanqi Jiang , Yi Pan , Xiaobo Li , Tianming Liu , Xi Jiang , Lin Zhao

Neural networks leverage robust internal representations in order to generalise. Learning them is difficult, and often requires a large training set that covers the data distribution densely. We study a common setting where our task is not…

Backpropagation (BP) has been pivotal in advancing machine learning and remains essential in computational applications and comparative studies of biological and artificial neural networks. Despite its widespread use, the implementation of…

Neurons and Cognition · Quantitative Biology 2025-04-15 Xinhao Fan , Shreesh P Mysore

While successful for various computer vision tasks, deep neural networks have shown to be vulnerable to texture style shifts and small perturbations to which humans are robust. In this work, we show that the robustness of neural networks…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Zhenlin Xu , Deyi Liu , Junlin Yang , Colin Raffel , Marc Niethammer

Brain activity is intrinsically a neural dynamic process constrained by anatomical space. This leads to significant variations in spatial distribution patterns and correlation patterns of neural activity across variable and heterogeneous…

Machine Learning · Computer Science 2026-03-10 Hongjie Jiang , Yifei Tang , Shuqiang Wang

Multi-modal MRIs are widely used in neuroimaging applications since different MR sequences provide complementary information about brain structures. Recent works have suggested that multi-modal deep learning analysis can benefit from…

Computer Vision and Pattern Recognition · Computer Science 2021-06-14 Jiahong Ouyang , Ehsan Adeli , Kilian M. Pohl , Qingyu Zhao , Greg Zaharchuk
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