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This paper introduces a new proximity graph, called the $k$-Semi-Yao graph ($k$-SYG), on a set $P$ of points in $\mathbb{R}^d$, which is a supergraph of the $k$-nearest neighbor graph ($k$-NNG) of $P$. We provide a kinetic data structure…

Computational Geometry · Computer Science 2014-12-19 Zahed Rahmati , Mohammad Ali Abam , Valerie King , Sue Whitesides

Sequential dynamical systems (SDS) are used to model a wide range of processes occurring on graphs or networks. The dynamics of such discrete dynamical systems is completely encoded by their phase space, a directed graph whose vertices and…

Dynamical Systems · Mathematics 2017-02-03 Raffaele Rani , Poul G. Hjorth

This paper introduces the induced matching distance, a novel topological metric designed to compare discrete structures represented by a symmetric non-negative function. We apply this notion to analyze agent trajectories over time. We use…

Algebraic Topology · Mathematics 2025-02-18 Javier Perera-Lago , Álvaro Torras-Casas , Jérôme Guzzi , Rocio Gonzalez-Diaz

We integrate sampling-based planning techniques with funnel-based feedback control to develop KDF, a new framework for solving the kinodynamic motion-planning problem via funnel control. The considered systems evolve subject to complex,…

Robotics · Computer Science 2021-04-27 Christos K. Verginis , Dimos V. Dimarogonas , Lydia E. Kavraki

This paper aims to discuss a method of quantifying the 'shape' of data, via a methodology called topological data analysis. The main tool within topological data analysis is persistent homology; this is a means of measuring the shape of…

Algebraic Topology · Mathematics 2022-09-14 Tristan Gowdridge , Nikolaos Devilis , Keith Worden

Given a persistence diagram with $n$ points, we give an algorithm that produces a sequence of $n$ persistence diagrams converging in bottleneck distance to the input diagram, the $i$th of which has $i$ distinct (weighted) points and is a…

Computational Geometry · Computer Science 2020-12-04 Donald R. Sheehy , Siddharth Sheth

We present a dynamic data structure for maintaining the persistent homology of a time series of real numbers. The data structure supports local operations, including the insertion and deletion of an item and the cutting and concatenating of…

Data Structures and Algorithms · Computer Science 2024-07-03 Sebastiano Cultrera di Montesano , Herbert Edelsbrunner , Monika Henzinger , Lara Ost

A time series is a sequence of data items; typical examples are videos, stock ticker data, or streams of temperature measurements. Quite some research has been devoted to comparing and indexing simple time series, i.e., time series where…

Computational Complexity · Computer Science 2018-06-04 Jörg P. Bachmann , Johann-Christoph Freytag , Benjamin Hauskeller , Nicole Schweikardt

In this chapter we summarize recent developments in the study of kinetically constrained models (KCMs) as models for glass formers. After recalling the definition of the KCMs which we cover we study the possible occurrence of ergodicity…

Statistical Mechanics · Physics 2010-10-01 Juan P. Garrahan , Peter Sollich , Cristina Toninelli

Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

Persistent homology is a popular computational tool for analyzing the topology of point clouds, such as the presence of loops or voids. However, many real-world datasets with low intrinsic dimensionality reside in an ambient space of much…

Machine Learning · Computer Science 2024-11-01 Sebastian Damrich , Philipp Berens , Dmitry Kobak

Our aim is to develop dynamic data structures that support $k$-nearest neighbors ($k$-NN) queries for a set of $n$ point sites in the plane in $O(f(n) + k)$ time, where $f(n)$ is some polylogarithmic function of $n$. The key component is a…

Computational Geometry · Computer Science 2022-12-02 Sarita de Berg , Frank Staals

This paper provides an algorithmic pipeline for studying the intrinsic structure of a finite discrete dynamical system (DDS) modelling an evolving phenomenon. Here, by intrinsic structure we mean, regarding the dynamics of the DDS under…

Dynamical Systems · Mathematics 2022-12-20 Alberto Dennunzio , Enrico Formenti , Luciano Margara , Sara Riva

Persistence diagrams (PDs) play a key role in topological data analysis (TDA), in which they are routinely used to describe topological properties of complicated shapes. PDs enjoy strong stability properties and have proven their utility in…

Computational Geometry · Computer Science 2017-11-10 Mathieu Carrière , Marco Cuturi , Steve Oudot

This paper introduces a time-domain harmonic balance unified gas-kinetic scheme (HB-UGKS) designed to simulate temporally periodic flows across all Knudsen regimes. The harmonic balance approach reformulates the periodic problem into a…

Fluid Dynamics · Physics 2026-05-06 Yuze Zhu , Hangkong Wu , Yufeng Wei , Kun Xu

We fully generalize a previously-developed computational geometry tool [1] to perform large-scale simulations of arbitrary two-dimensional faceted surfaces $z = h(x,y)$. Our method uses a three-component facet/edge/junction storage model,…

Mathematical Physics · Physics 2011-10-17 Scott A. Norris , Stephen J. Watson

This article proposes a topological method that extracts hierarchical structures of various amorphous solids. The method is based on the persistence diagram (PD), a mathematical tool for capturing shapes of multiscale data. The input to the…

The largest source of systematic errors in the time-delay cosmography method likely arises from the lens model mass distribution, where an inaccurate choice of model could in principle bias the value of $H_0$. A Bayesian hierarchical…

Cosmology and Nongalactic Astrophysics · Physics 2022-11-09 Matthew R. Gomer , Dominique Sluse , Lyne Van de Vyvere , Simon Birrer , Frederic Courbin

The conventional view of the congestion control problem in data networks is based on the principle that a flow's performance is uniquely determined by the state of its bottleneck link, regardless of the topological properties of the…

Networking and Internet Architecture · Computer Science 2022-10-10 Jordi Ros-Giralt , Noah Amsel , Sruthi Yellamraju , James Ezick , Richard Lethin , Yuang Jiang , Aosong Feng , Leandros Tassiulas

We introduce the persistent homotopy type distance dHT to compare real valued functions defined on possibly different homotopy equivalent topological spaces. The underlying idea in the definition of dHT is to measure the minimal shift that…

Computational Geometry · Computer Science 2018-03-06 Patrizio Frosini , Claudia Landi , Facundo Memoli