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The graph partitioning problem is a well-known NP-hard problem. In this paper, we formulate a 0-1 quadratic integer programming model for the graph partitioning problem with vertex weight constraints and fixed vertex constraints, and…
The maximal biclique enumeration problem in bipartite graphs is fundamental and has numerous applications in E-commerce and transaction networks. Most existing studies adopt a branch-and-bound framework, which recursively expands a partial…
Cluster deletion is an NP-hard graph clustering objective with applications in computational biology and social network analysis, where the goal is to delete a minimum number of edges to partition a graph into cliques. We first provide a…
The Cluster Deletion problem takes a graph $G$ as input and asks for a minimum size set of edges $X$ such that $G-X$ is the disjoint union of complete graphs. An equivalent formulation is the Clique Partition problem, which asks to find a…
Biclustering is the task of simultaneously clustering the rows and columns of the data matrix into different subgroups such that the rows and columns within a subgroup exhibit similar patterns. In this paper, we consider the case of…
Finding dense bipartite subgraphs and detecting the relations among them is an important problem for affiliation networks that arise in a range of domains, such as social network analysis, word-document clustering, the science of science,…
The subgraph-centric programming model is a promising approach and has been applied in many state-of-the-art distributed graph computing frameworks. However, traditional graph partition algorithms have significant difficulties in processing…
Finding (bi-)clusters in bipartite graphs is a popular data analysis approach. Analysts typically want to visualize the clusters, which is simple as long as the clusters are disjoint. However, many modern algorithms find overlapping…
The K-way vertex cut problem} consists in, given a graph G, finding a subset of vertices of a given size, whose removal partitions G into the maximum number of connected components. This problem has many applications in several areas. It…
The splitting number of a graph $G=(V,E)$ is the minimum number of vertex splits required to turn $G$ into a planar graph, where a vertex split removes a vertex $v \in V$, introduces two new vertices $v_1, v_2$, and distributes the edges…
We study the Balanced Connected Subgraph(shortly, BCS) problem on geometric intersection graphs such as interval, circular-arc, permutation, unit-disk, outer-string graphs, etc. Given a vertex-colored graph $G=(V,E)$, where each vertex in…
Biclustering is a powerful data mining technique that allows simultaneously clustering rows (observations) and columns (features) in a matrix-format data set, which can provide results in a checkerboard-like pattern for visualization and…
For $t\geq 3$, $K_{1, t}$ is called $t$-claw. In minimum $t$-claw deletion problem (\texttt{Min-$t$-Claw-Del}), given a graph $G=(V, E)$, it is required to find a vertex set $S$ of minimum size such that $G[V\setminus S]$ is $t$-claw free.…
There has recently been much progress on exact algorithms for the (un)weighted graph (bi)partitioning problem using branch-and-bound and related methods. In this note we present and improve an easily computable, purely combinatorial lower…
The independent set on a graph $G=(V,E)$ is a subset of $V$ such that no two vertices in the subset have an edge between them. The MIS problem on $G$ seeks to identify an independent set with maximum cardinality, i.e. maximum independent…
Many datasets take the form of a bipartite graph where two types of nodes are connected by relationships, like the movies watched by a user or the tags associated with a file. The partitioning of the bipartite graph could be used to fasten…
Identifying dense bipartite subgraphs is a common graph data mining task. Many applications focus on the enumeration of all maximal bicliques (MBs), though sometimes the stricter variant of maximal induced bicliques (MIBs) is of interest.…
Cohesive subgraph mining in bipartite graphs becomes a popular research topic recently. An important structure k-bitruss is the maximal cohesive subgraph where each edge is contained in at least k butterflies (i.e., (2, 2)-bicliques). In…
Graph clustering is an important algorithmic technique for analysing massive graphs, and has been widely applied in many research fields of data science. While the objective of most graph clustering algorithms is to find a vertex set of low…
In this paper, we develop a new decomposition technique for solving bi-objective linear programming problems. The proposed methodology combines the bi-objective simplex algorithm with Benders decomposition and can be used to obtain a…