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In the current era, DeoxyriboNucleic Acid (DNA) based data storage emerges as an intriguing approach, garnering substantial academic interest and investigation. This paper introduces a novel deep joint source-channel coding (DJSCC) scheme…

Emerging Technologies · Computer Science 2023-11-03 Wenfeng Wu , Luping Xiang , Qiang Liu , Kun Yang

We report an accurate method to determine DNA barcodes from the dwell time measurement of protein tags (barcodes) along the DNA backbone using Brownian dynamics simulation of a model DNA and use a recursive theoretical scheme which improves…

Soft Condensed Matter · Physics 2021-02-09 Swarnadeep Seth , Aniket Bhattacharya

Deep supervised hashing is essential for efficient storage and search in large-scale image retrieval. Traditional deep supervised hashing models generate single-length hash codes, but this creates a trade-off between efficiency and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-02 Liyang He , Yuren Zhang , Rui Li , Zhenya Huang , Runze Wu , Enhong Chen

DNA storage technology offers new possibilities for addressing massive data storage due to its high storage density, long-term preservation, low maintenance cost, and compact size. To improve the reliability of stored information, base…

Machine Learning · Computer Science 2024-09-24 Bowen Liu , Jiankun Li

The problem of storing large amounts of information safely for a long period of time has become essential. One of the most promising new data storage mediums are the polymer-based data storage systems, like the DNA-storage system. These…

Information Theory · Computer Science 2025-04-21 Ville Junnila , Tero Laihonen , Tuomo Lehtilä

Data compression plays an important role to deal with high volumes of DNA sequences in the field of Bioinformatics. Again data compression techniques directly affect the alignment of DNA sequences. So the time needed to decompress a…

Computational Engineering, Finance, and Science · Computer Science 2012-11-13 Subhankar Roy , Sunirmal Khatua , Sudipta Roy , Samir K. Bandyopadhyay

In this paper, we propose a novel conservative chaotic standard map-driven dynamic DNA coding (encoding, addition, subtraction and decoding) for the image encryption. The proposed image encryption algorithm is a dynamic DNA coding algorithm…

Cryptography and Security · Computer Science 2023-10-24 Vinod Patidar , Gurpreet Kaur

Deep Neural Networks (DNNs) have emerged as the most effective programming paradigm for computer vision and natural language processing applications. With the rapid development of DNNs, efficient hardware architectures for deploying…

Hardware Architecture · Computer Science 2023-02-09 Thai-Hoang Nguyen , Muhammad Imran , Jaehyuk Choi , Joon-Sung Yang

Two concatenated coding schemes based on fixed-rate Raptor codes are proposed for error control in NAND flash memory. One is geared for off-line recovery of uncorrectable pages and the other is designed for page error correction during the…

Information Theory · Computer Science 2013-12-23 Geunyeong Yu , Jaekyun Moon

DNA-based storage has emerged as a promising approach to the global data crisis, offering molecular-scale density and millennial-scale stability at low maintenance cost. Over the past decade, substantial progress has been made in storing…

Computer Vision and Pattern Recognition · Computer Science 2026-04-16 Cihan Ruan , Lebin Zhou , Bingqing Zhao , Rongduo Han , Qiming Yuan , Chenchen Zhu , Linyi Han , Liang Yang , Wei Wang , Wei Jiang , Nam Ling

We introduce a novel method to analyse complete genomes and recognise some distinctive features by means of an adaptive compression algorithm, which is not DNA-oriented. We study the Information Content as a function of the number of…

Genomics · Quantitative Biology 2007-05-23 Giulia Menconi

We describe properties and constructions of constraint-based codes for DNA-based data storage which account for the maximum repetition length and AT/GC balance. We present algorithms for computing the number of sequences with maximum…

Information Theory · Computer Science 2018-12-18 Kees A. Schouhamer Immink , Kui Cai

We consider the problem of assembling a sequence based on a collection of its substrings observed through a noisy channel. The mathematical basis of the problem is the construction and design of sequences that may be discriminated based on…

Information Theory · Computer Science 2015-11-04 Han Mao Kiah , Gregory J. Puleo , Olgica Milenkovic

Advances in DNA nanotechnology have stimulated the search for simple motifs that can be used to control the properties of DNA nanostructures. One such motif, which has been used extensively in structures such as polyhedral cages,…

Soft Condensed Matter · Physics 2015-06-10 John S. Schreck , Thomas E. Ouldridge , Flavio Romano , Ard A. Louis , Jonathan P. K. Doye

SNNs promise energy-efficient and low-latency inference, but their performance still trails that of ANNs. ANN-to-SNN knowledge distillation helps narrow this gap, yet the original training data are often unavailable in practical deployment…

Neural and Evolutionary Computing · Computer Science 2026-05-28 Shuhan Ye , Yi Yu , Qixin Zhang , Hui Lu , Jiaming He , Qinggang Zhang , Li Shen , Xudong Jiang

Diffraction drastically limits the bit density in optical data storage. To increase the storage density, alternative strategies involving supplementary recording dimensions and robust read-out schemes must be explored. Here, we propose to…

Applied Physics · Physics 2020-01-28 Peter R. Wiecha , Aurélie Lecestre , Nicolas Mallet , Guilhem Larrieu

Differentially Private Stochastic Gradient Descent (DPSGD) is widely utilized to preserve training data privacy in deep learning, which first clips the gradients to a predefined norm and then injects calibrated noise into the training…

Machine Learning · Computer Science 2024-05-29 Haichao Sha , Yang Cao , Yong Liu , Yuncheng Wu , Ruixuan Liu , Hong Chen

Class imbalance, which is also called long-tailed distribution, is a common problem in classification tasks based on machine learning. If it happens, the minority data will be overwhelmed by the majority, which presents quite a challenge…

Machine Learning · Computer Science 2023-03-29 Jia-Chen Zhao

The exponential increase in storage demand and low lifespan of data storage devices has resulted in long-term archival and preservation emerging as a critical bottlenecks in data storage. In order to meet this demand, researchers are now…

Image and Video Processing · Electrical Eng. & Systems 2025-05-22 Xavier Pic , Raja Appuswamy

In modern age, the increasing complexity of computation and communication technology is leading us towards the necessity of new paradigm. As a result, unconventional approach like DNA coding theory is gaining considerable attention. The…

Information Theory · Computer Science 2023-08-07 Mandrita Mondal , Kumar S. Ray