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Graph Neural Networks (GNNs) have emerged as powerful models for learning from graph-structured data. However, their widespread adoption has raised serious privacy concerns. While prior research has primarily focused on edge-level privacy,…

Machine Learning · Computer Science 2025-11-12 Jie Fu , Yuan Hong , Zhili Chen , Wendy Hui Wang

Graph neural networks (GNNs) are widely used in many applications. However, their robustness against adversarial attacks is criticized. Prior studies show that using unnoticeable modifications on graph topology or nodal features can…

Machine Learning · Computer Science 2020-02-27 Xianfeng Tang , Yandong Li , Yiwei Sun , Huaxiu Yao , Prasenjit Mitra , Suhang Wang

Graph Neural Networks (GNNs) are a powerful tool for machine learning on graphs.GNNs combine node feature information with the graph structure by recursively passing neural messages along edges of the input graph. However, incorporating…

Machine Learning · Computer Science 2019-11-15 Rex Ying , Dylan Bourgeois , Jiaxuan You , Marinka Zitnik , Jure Leskovec

The last few years have seen an increasing wave of attacks with serious economic and privacy damages, which evinces the need for accurate Network Intrusion Detection Systems (NIDS). Recent works propose the use of Machine Learning (ML)…

Cryptography and Security · Computer Science 2021-08-02 David Pujol-Perich , José Suárez-Varela , Albert Cabellos-Aparicio , Pere Barlet-Ros

Graph neural networks (GNNs) have attracted increasing attention due to their superior performance in deep learning on graph-structured data. GNNs have succeeded across various domains such as social networks, chemistry, and electronic…

Cryptography and Security · Computer Science 2022-08-19 Lilas Alrahis , Satwik Patnaik , Muhammad Shafique , Ozgur Sinanoglu

Recent studies have shown that graph neural networks (GNNs) are vulnerable to adversarial attacks, posing significant challenges to their deployment in safety-critical scenarios. This vulnerability has spurred a growing focus on designing…

Machine Learning · Computer Science 2025-05-27 Tao Wu , Canyixing Cui , Xingping Xian , Shaojie Qiao , Chao Wang , Lin Yuan , Shui Yu

Recently, Graph Neural Networks (GNNs) have significantly advanced the performance of machine learning tasks on graphs. However, this technological breakthrough makes people wonder: how does a GNN make such decisions, and can we trust its…

Machine Learning · Computer Science 2024-02-26 Xiaoqi Wang , Han-Wei Shen

Trust evaluation is critical for many applications such as cyber security, social communication and recommender systems. Users and trust relationships among them can be seen as a graph. Graph neural networks (GNNs) show their powerful…

Machine Learning · Computer Science 2022-05-26 Cuiying Huo , Di Jin , Chundong Liang , Dongxiao He , Tie Qiu , Lingfei Wu

Graph Neural Networks (GNNs) have gained significant attention owing to their ability to handle graph-structured data and the improvement in practical applications. However, many of these models prioritize high utility performance, such as…

Machine Learning · Computer Science 2023-09-20 Yi Zhang , Yuying Zhao , Zhaoqing Li , Xueqi Cheng , Yu Wang , Olivera Kotevska , Philip S. Yu , Tyler Derr

Graph Neural Networks (GNNs) have shown success in learning from graph structured data containing node/edge feature information, with application to social networks, recommendation, fraud detection and knowledge graph reasoning. In this…

Machine Learning · Computer Science 2021-11-24 Xiang Song , Runjie Ma , Jiahang Li , Muhan Zhang , David Paul Wipf

Graph neural networks (GNNs) have emerged as a series of competent graph learning methods for diverse real-world scenarios, ranging from daily applications like recommendation systems and question answering to cutting-edge technologies such…

Machine Learning · Computer Science 2024-02-22 He Zhang , Bang Wu , Xingliang Yuan , Shirui Pan , Hanghang Tong , Jian Pei

Graph Neural Networks (GNNs) have emerged as the predominant approach for learning over graph-structured data. However, most GNNs operate as black-box models and require post-hoc explanations, which may not suffice in high-stakes scenarios…

Machine Learning · Computer Science 2025-10-14 Maya Bechler-Speicher , Amir Globerson , Ran Gilad-Bachrach

Graph Neural Networks (GNNs) have become increasingly important due to their representational power and state-of-the-art predictive performance on many fundamental learning tasks. Despite this success, GNNs suffer from fairness issues that…

Machine Learning · Computer Science 2023-07-11 April Chen , Ryan A. Rossi , Namyong Park , Puja Trivedi , Yu Wang , Tong Yu , Sungchul Kim , Franck Dernoncourt , Nesreen K. Ahmed

The emergence of Graph Neural Networks (GNNs) in graph data analysis and their deployment on Machine Learning as a Service platforms have raised critical concerns about data misuse during model training. This situation is further…

Machine Learning · Computer Science 2023-12-14 Bang Wu , He Zhang , Xiangwen Yang , Shuo Wang , Minhui Xue , Shirui Pan , Xingliang Yuan

Graph neural networks (GNNs), as topology/structure-aware models within deep learning, have emerged as powerful tools for AI-aided drug discovery (AIDD). By directly operating on molecular graphs, GNNs offer an intuitive and expressive…

Biomolecules · Quantitative Biology 2025-06-10 Odin Zhang , Haitao Lin , Xujun Zhang , Xiaorui Wang , Zhenxing Wu , Qing Ye , Weibo Zhao , Jike Wang , Kejun Ying , Yu Kang , Chang-yu Hsieh , Tingjun Hou

Predictions made by graph neural networks (GNNs) usually lack interpretability due to their complex computational behavior and the abstract nature of graphs. In an attempt to tackle this, many GNN explanation methods have emerged. Their…

Machine Learning · Computer Science 2024-10-21 Zhong Li , Simon Geisler , Yuhang Wang , Stephan Günnemann , Matthijs van Leeuwen

Graph Neural Networks (GNNs) have become an effective tool for malware detection by capturing program execution through graph-structured representations. However, important challenges remain regarding scalability, interpretability, and the…

Cryptography and Security · Computer Science 2025-11-27 Hossein Shokouhinejad , Griffin Higgins , Roozbeh Razavi-Far , Ali A. Ghorbani

Graph Neural Networks (GNNs) have enjoyed wide spread applications in graph-structured data. However, existing graph based applications commonly lack annotated data. GNNs are required to learn latent patterns from a limited amount of…

Machine Learning · Computer Science 2023-03-22 Wenqi Wei , Mu Qiao , Divyesh Jadav

Graph Neural Networks (GNNs) excel in graph-based learning tasks, but their complex, non-linear operations often render them as opaque "black boxes". This opacity hinders user trust, complicates debugging, bias detection, and adoption in…

Artificial Intelligence · Computer Science 2025-11-18 TC Singh , Sougata Mukherjea

Graph Neural Networks (GNNs) have emerged as the dominant approach for machine learning on graph-structured data. However, concerns have arisen regarding the vulnerability of GNNs to small adversarial perturbations. Existing defense methods…

Machine Learning · Computer Science 2024-02-22 Sofiane Ennadir , Yassine Abbahaddou , Johannes F. Lutzeyer , Michalis Vazirgiannis , Henrik Boström