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Traditional clustering methods are limited when dealing with huge and heterogeneous groups of gene expression data, which motivates the development of bi-clustering methods. Bi-clustering methods are used to mine bi-clusters whose subsets…

Computer Vision and Pattern Recognition · Computer Science 2020-05-13 Kaijie Xu , Witold Pedrycz , Zhiwu Li , Yinghui Quan , Weike Nie

Hyperspectral image (HSI) clustering is a challenging task due to the high complexity of HSI data. Subspace clustering has been proven to be powerful for exploiting the intrinsic relationship between data points. Despite the impressive…

Computer Vision and Pattern Recognition · Computer Science 2020-09-01 Yaoming Cai , Zijia Zhang , Zhihua Cai , Xiaobo Liu , Xinwei Jiang , Qin Yan

Tensor clustering, which seeks to extract underlying cluster structures from noisy tensor observations, has gained increasing attention. One extensively studied model for tensor clustering is the tensor block model, which postulates the…

Statistics Theory · Mathematics 2023-11-07 Yuchen Zhou , Yuxin Chen

Future terabit networks are committed to dramatically improving big data motion between geographically dispersed HPC data centers.The scientific community takes advantage of the terabit networks such as DOE's ESnet and accelerates the trend…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-23 Awais Khan , Taeuk Kim , Hyunki Byun , Youngjae Kim , Sungyong Park , Hyogi Sim

Convolutional neural networks (CNNs) have been recently used for a variety of histology image analysis. However, availability of a large dataset is a major prerequisite for training a CNN which limits its use by the computational pathology…

Computer Vision and Pattern Recognition · Computer Science 2018-03-07 Ruqayya Awan , Navid Alemi Koohbanani , Muhammad Shaban , Anna Lisowska , Nasir Rajpoot

Although High Performance Computing (HPC) users understand basic resource requirements such as the number of CPUs and memory limits, internal infrastructural utilization data is exclusively leveraged by cluster operators, who use it to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-19 Abel Souza , Kristiaan Pelckmans , Johan Tordsson

The rapid growth of graph data creates significant scalability challenges as most graph algorithms scale quadratically with size. To mitigate these issues, Graph Condensation (GC) methods have been proposed to learn a small graph from a…

Machine Learning · Computer Science 2025-08-06 Shengbo Gong , Mohammad Hashemi , Juntong Ni , Carl Yang , Wei Jin

The discrete distribution clustering algorithm, namely D2-clustering, has demonstrated its usefulness in image classification and annotation where each object is represented by a bag of weighed vectors. The high computational complexity of…

Machine Learning · Computer Science 2013-02-07 Yu Zhang , James Z. Wang , Jia Li

Data prefetching--loading data into the cache before it is requested--is essential for reducing I/O overhead and improving database performance. While traditional prefetchers focus on sequential patterns, recent learning-based approaches,…

Databases · Computer Science 2025-10-14 Farzaneh Zirak , Farhana Choudhury , Renata Borovica-Gajic

Crowd counting on static images is a challenging problem due to scale variations. Recently deep neural networks have been shown to be effective in this task. However, existing neural-networks-based methods often use the multi-column or…

Computer Vision and Pattern Recognition · Computer Science 2017-02-09 Lingke Zeng , Xiangmin Xu , Bolun Cai , Suo Qiu , Tong Zhang

Phenomics is an emerging branch of modern biology that uses high throughput phenotyping tools to capture multiple environmental and phenotypic traits, often at massive spatial and temporal scales. The resulting high dimensional data…

Quantitative Methods · Quantitative Biology 2019-06-06 Methun Kamruzzaman , Ananth Kalyanaraman , Bala Krishnamoorthy , Stefan Hey , Patrick Schnable

Graph convolutional networks (GCNs) have demonstrated superiority in graph-based learning tasks. However, training GCNs on full graphs is particularly challenging, due to the following two challenges: (1) the associated feature tensors can…

Machine Learning · Computer Science 2025-02-26 Cheng Wan , Runkai Tao , Zheng Du , Yang Katie Zhao , Yingyan Celine Lin

Graph Convolutional Networks (GCNs) are extensively utilized for deep learning on graphs. The large data sizes of graphs and their vertex features make scalable training algorithms and distributed memory systems necessary. Since the…

Machine Learning · Computer Science 2022-12-14 Gunduz Vehbi Demirci , Aparajita Haldar , Hakan Ferhatosmanoglu

The amount of remote sensing data available to applications is constantly growing due to the rise of very-high-resolution sensors and short repeat cycle satellites. Consequently, tackling computational complexity in Earth Observation…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-09-29 Remi Cresson

We show that the signal-processing paradigm known as compressed sensing (CS) is applicable to genome-wide association studies (GWAS) and genomic selection (GS). The aim of GWAS is to isolate trait-associated loci, whereas GS attempts to…

Genomics · Quantitative Biology 2014-05-13 Shashaank Vattikuti , James J. Lee , Christopher C. Chang , Stephen D. H. Hsu , Carson C. Chow

In the era of data-driven science, conducting computational experiments that involve analysing large datasets using heterogeneous computational clusters, is part of the everyday routine for many scientists. Moreover, to ensure the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-23 Thanasis Vergoulis , Konstantinos Zagganas , Loukas Kavouras , Martin Reczko , Stelios Sartzetakis , Theodore Dalamagas

In the rapidly evolving domain of next generation sequencing and bioinformatics analysis, data generation is one aspect that is increasing at a concomitant rate. The burden associated with processing large amounts of sequencing data has…

Genomics · Quantitative Biology 2015-03-11 Matthew J. Wade , Thomas P. Curtis , Russell J. Davenport

Nowadays, with the widespread of smartphones and other portable gadgets equipped with a variety of sensors, data is ubiquitous available and the focus of machine learning has shifted from being able to infer from small training samples to…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-07-07 Radu Cristian Ionescu

The goal of this paper is to design image classification systems that, after an initial multi-task training phase, can automatically adapt to new tasks encountered at test time. We introduce a conditional neural process based approach to…

Machine Learning · Statistics 2020-07-14 James Requeima , Jonathan Gordon , John Bronskill , Sebastian Nowozin , Richard E. Turner

Biclustering algorithms play a central role in the biotechnological and biomedical domains. The knowledge extracted supports the extraction of putative regulatory modules, essential to understanding diseases, aiding therapy research, and…

Databases · Computer Science 2022-12-13 Leonardo Alexandre , Rafael S. Costa , Rui Henriques
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