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Assessing chronic pain behavior in mice is critical for preclinical studies. However, existing methods mostly rely on manual labeling of behavioral features, and humans lack a clear understanding of which behaviors best represent chronic…

Computer Vision and Pattern Recognition · Computer Science 2025-08-08 Yu-Hsi Chen , Wei-Hsin Chen , Chien-Yao Wang , Hong-Yuan Mark Liao , James C. Liao , Chien-Chang Chen

We introduce SurgFormer, a multiresolution gated transformer for data driven soft tissue simulation on volumetric meshes. High fidelity biomechanical solvers are often too costly for interactive use, so we train SurgFormer on solver…

Computer Vision and Pattern Recognition · Computer Science 2026-03-09 Ashkan Shahbazi , Elaheh Akbari , Kyvia Pereira , Jon S. Heiselman , Annie C. Benson , Garrison L. H. Johnston , Jie Ying Wu , Nabil Simaan , Michael I. Miga , Soheil Kolouri

Cardiac biosignals, such as electrocardiograms (ECG) and photoplethysmograms (PPG), are of paramount importance for the diagnosis, prevention, and management of cardiovascular diseases, and have been extensively used in a variety of…

Foundation models (FMs) have shown great promise in medical imaging, but most FMs are trained on unimodal data within isolated domains, such as brain MRI alone. Human aging and disease arise through coordinated biological processes across…

Computer Vision and Pattern Recognition · Computer Science 2026-05-11 Qiangqiang Wu , Grace McIlvain , Zhou Yu , Junhao Wen

Whole Slide Image (WSI) analysis, with its ability to reveal detailed tissue structures in magnified views, plays a crucial role in cancer diagnosis and prognosis. Due to their giga-sized nature, WSIs require substantial storage and…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Doanh Cao Bui , Jin Tae Kwak

Segmentation models are important tools for the detection and analysis of lesions in brain MRI. Depending on the type of brain pathology that is imaged, MRI scanners can acquire multiple, different image modalities (contrasts). Most…

Computer Vision and Pattern Recognition · Computer Science 2025-09-12 Anthony P. Addison , Felix Wagner , Wentian Xu , Natalie Voets , Konstantinos Kamnitsas

Developing artificial intelligence (AI) and machine learning (ML) models for medical imaging typically involves extensive training and testing on large datasets, consuming significant computational time, energy, and resources. There is a…

Image and Video Processing · Electrical Eng. & Systems 2024-12-13 Raj Hansini Khoiwal , Alan B. McMillan

Amortized Bayesian inference trains neural networks to solve stochastic inference problems using model simulations, thereby making it possible to rapidly perform Bayesian inference for any newly observed data. However, current…

Machine Learning · Computer Science 2024-07-16 Manuel Gloeckler , Michael Deistler , Christian Weilbach , Frank Wood , Jakob H. Macke

Foundation models have recently gained significant attention because of their generalizability and adaptability across multiple tasks and data distributions. Although medical foundation models have emerged, solutions for cardiac imaging,…

Computer Vision and Pattern Recognition · Computer Science 2025-01-30 Sekeun Kim , Pengfei Jin , Sifan Song , Cheng Chen , Yiwei Li , Hui Ren , Xiang Li , Tianming Liu , Quanzheng Li

Medical image segmentation supports clinical workflows by precisely delineating anatomical structures and lesions. However, medical image datasets medical image datasets suffer from acquisition noise and annotation ambiguity, causing…

Artificial Intelligence · Computer Science 2026-04-14 Ruiyang Li , Fang Liu , Licheng Jiao , Xinglin Xie , Jiayao Hao , Shuo Li , Xu Liu , Jingyi Yang , Lingling Li , Puhua Chen , Wenping Ma

Photoplethysmography (PPG) sensor in wearable and clinical devices provides valuable physiological insights in a non-invasive and real-time fashion. Specialized Foundation Models (FM) or repurposed time-series FMs are used to benchmark…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Saurabh Kataria , Ayca Ermis , Lovely Yeswanth Panchumarthi , Minxiao Wang , Xiao Hu

Autism Spectrum Disorder (ASD) is a complex neurodevelopmental condition marked by disruptions in brain connectivity. Functional MRI (fMRI) offers a non-invasive window into large-scale neural dynamics by measuring…

Machine Learning · Computer Science 2025-08-20 Mohammad Izadi , Mehran Safayani

We present a keypoint-based foundation model for general purpose brain MRI registration, based on the recently-proposed KeyMorph framework. Our model, called BrainMorph, serves as a tool that supports multi-modal, pairwise, and scalable…

Computer Vision and Pattern Recognition · Computer Science 2025-06-10 Alan Q. Wang , Rachit Saluja , Heejong Kim , Xinzi He , Adrian Dalca , Mert R. Sabuncu

Brain diseases, such as Alzheimer's disease and brain tumors, present profound challenges due to their complexity and societal impact. Recent advancements in brain foundation models have shown significant promise in addressing a range of…

Computer Vision and Pattern Recognition · Computer Science 2025-05-02 Zhongying Deng , Haoyu Wang , Ziyan Huang , Lipei Zhang , Angelica I. Aviles-Rivero , Chaoyu Liu , Junjun He , Zoe Kourtzi , Carola-Bibiane Schönlieb

Human sensing, which employs various sensors and advanced deep learning technologies to accurately capture and interpret human body information, has significantly impacted fields like public security and robotics. However, current human…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Xinyan Chen , Jianfei Yang

Quality molecular representations are key to foundation model development in bio-medical research. Previous efforts have typically focused on a single representation or molecular view, which may have strengths or weaknesses on a given task.…

Fatigue is a broad, multifactorial concept that includes the subjective perception of reduced physical and mental energy levels. It is also one of the key factors that strongly affect patients' health-related quality of life. To date, most…

Human-Computer Interaction · Computer Science 2021-08-10 Yang Bai , Yu Guan , Jian Qing Shi , Wan-Fai Ng

The rapid development of Vision Foundation Models (VFMs), particularly Vision Transformers (ViT) and Segment Anything Model (SAM), has sparked significant advances in the field of medical image analysis. These models have demonstrated…

Image and Video Processing · Electrical Eng. & Systems 2025-02-24 Pengchen Liang , Bin Pu , Haishan Huang , Yiwei Li , Hualiang Wang , Weibo Ma , Qing Chang

Sensor-based Human Activity Recognition (HAR) underpins many ubiquitous and wearable computing applications, yet current models remain limited by scarce labels, sensor heterogeneity, and weak generalization across users, devices, and…

Signal Processing · Electrical Eng. & Systems 2026-04-10 Sizhen Bian , Mengxi Liu , Lala Shakti Swarup Ray , Bo Zhou , Bin Guo , Zhiwen Yu , Thomas Ploetz , Paul Lukowicz , Siyu Yuan , Vitor Fortes Rey

Foundation models (FMs) are transforming computational pathology by offering new ways to analyze histopathology images. However, FMs typically require weeks of training on large databases, making their creation a resource-intensive process.…

Image and Video Processing · Electrical Eng. & Systems 2026-01-27 Till Nicke , Daniela Schacherer , Jan Raphael Schäfer , Natalia Artysh , Antje Prasse , André Homeyer , Andrea Schenk , Henning Höfener , Johannes Lotz
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