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Accurately reconstructing Gene Regulatory Networks (GRNs) is crucial for understanding gene functions and disease mechanisms. Single-cell RNA sequencing (scRNA-seq) technology provides vast data for computational GRN reconstruction. Since…

Molecular Networks · Quantitative Biology 2025-12-16 Rijie Xi , Weikang Xu , Wei Xiong , Yuannong Ye , Bin Zhao

To keep supporting next-generation requirements, the radio access infrastructure will increasingly densify. Cell-free (CF) network architectures are emerging, combining dense deployments with extreme flexibility in allocating resources to…

Networking and Internet Architecture · Computer Science 2023-01-26 Vida Ranjbar , Adam Girycki , Md Arifur Rahman , Sofie Pollin , Marc Moonen , Evgenii Vinogradov

Gene Regulatory Network (GRN) inference is essential for understanding complex cellular mechanisms, rendered tractable through single-cell transcriptomic data. With the emergence of single-cell Foundation Models (scFMs), enhanced…

Machine Learning · Computer Science 2026-05-12 Jiaxin Qi , Hang Li , Yan Cui , Yuhua Zheng , Jianqiang Huang

Recent research shows that supervised learning can be an effective tool for designing near-optimal feedback controllers for high-dimensional nonlinear dynamic systems. But the behavior of neural network controllers is still not well…

Optimization and Control · Mathematics 2022-10-10 Tenavi Nakamura-Zimmerer , Qi Gong , Wei Kang

Cloud infrastructure provides computing services where computing resources can be adjusted on-demand. However, the adoption of cloud infrastructures brings concerns like reliance on the service provider network, reliability, compliance for…

Networking and Internet Architecture · Computer Science 2020-03-03 Aaqif Afzaal Abbasi , Shahab Shamshirband , Mohammed A. A. Al-qaness , Almas Abbasi , Nashat T. AL-Jallad , Amir Mosavi

Deterministic reaction networks (RNs) are tools to model diverse biological phenomena characterized by particle systems, when there are abundant number of particles. Examples include but are not limited to biochemistry, molecular biology,…

Molecular Networks · Quantitative Biology 2021-07-22 Carsten Wiuf , Chuang Xu

A new framework to perform routing at the Autonomous System level is proposed in this paper. This mechanism, called Chain Routing, uses complete orders as its main topological unit. Since complete orders are acyclic digraphs that possess a…

Networking and Internet Architecture · Computer Science 2012-01-25 P. David Arjona-Villicaña , Costas C. Constantinou , Alexander S. Stepanenko

Gene regulatory networks (GRNs) define the regulatory relationships among molecules such as transcription factors, chromatin remodelers, and target genes. GRNs play a critical role in diverse biological processes, including development,…

Molecular Networks · Quantitative Biology 2026-02-24 Junha Shin , Spencer Halberg-Spencer , Yuda Liu , Suvojit Hazra , Erika Da-Inn Lee , Sushmita Roy

In order to make Internet connections ubiquitous and autonomous in our daily lives, maximizing the utilization of radio resources and social information is one of the major research topics in future mobile communication technologies. Fog…

Information Theory · Computer Science 2017-07-24 Haijun Zhang , Yu Qiu , Xiaoli Chu , Keping Long , Victor C. M. Leung

This year, jurisdictions worldwide, including the United States, the European Union, the United Kingdom, and China, are set to enact or revise laws governing frontier AI. Their efforts largely rely on the assumption that increasing model…

Computers and Society · Computer Science 2025-02-25 Nicholas A. Caputo

The security of mobile robotic networks (MRNs) has been an active research topic in recent years. This paper demonstrates that the observable interaction process of MRNs under formation control will present increasingly severe threats.…

Systems and Control · Electrical Eng. & Systems 2021-06-07 Yushan Li , Jianping He , Xuda Ding , Lin Cai , Xinping Guan

Modern network defense can benefit from the use of autonomous systems, offloading tedious and time-consuming work to agents with standard and learning-enabled components. These agents, operating on critical network infrastructure, need to…

Artificial Intelligence · Computer Science 2024-11-07 Nicholas Potteiger , Ankita Samaddar , Hunter Bergstrom , Xenofon Koutsoukos

Background: Elucidating gene regulatory networks is crucial for understanding normal cell physiology and complex pathologic phenotypes. Existing computational methods for the genome-wide ``reverse engineering'' of such networks have been…

This article describes our strategy for deploying self-forming ad hoc networks based on the Internet Protocol version 6 and evaluates the dynamics of this proposal. Among others, we suggest a technique called adaptive routing that provides…

Networking and Internet Architecture · Computer Science 2007-05-23 Igor Sobrado , Dave Uhring

A prototype of modular networked robot for autonomous monitoring works with full control over web through wireless connection has been developed. The robot is equipped with a particular set of built-in analyzing tools and appropriate…

Robotics · Computer Science 2008-09-05 I. Firmansyah , Z. Akbar , B. Hermanto , L. T. Handoko

Smart grids are replacing conventional power grids due to rising electricity use, failing infrastructure, and reliability problems. Two-way communication, demand-side administration, and real-time pricing make smart grids (SGs) dependent on…

Systems and Control · Electrical Eng. & Systems 2024-10-28 Dennis Agnew , Sharon Boamah , Janise McNair

Operators perceive programmable networks brought by Software Defined Networks (SDN) as cornerstone to decrease the time to deploy new services, to augment the flexibility and to adapt network resources to customer needs at runtime. However,…

Networking and Internet Architecture · Computer Science 2015-07-13 José Sánchez , Imen Grida Ben Yahia , Noël Crespi

This work develops a robust adaptive control strategy for discrete-time systems using Control Barrier Functions (CBFs) to ensure safety under parametric model uncertainty and disturbances. A key contribution of this work is establishing a…

Systems and Control · Electrical Eng. & Systems 2026-02-05 Changrui Liu , Anil Alan , Shengling Shi , Bart De Schutter

Social network companies maintain complete visibility and ownership of the data they store. However users should be able to maintain full control over their content. For this purpose, we propose WARP, an architecture based upon…

Networking and Internet Architecture · Computer Science 2013-08-09 Fabio Angius , Cedric Westphal , Mario Gerla , Giovanni Pau

This report deals with security in wireless sensor networks (WSNs), especially in network layer. Multiple secure routing protocols have been proposed in the literature. However, they often use the cryptography to secure routing…

Networking and Internet Architecture · Computer Science 2010-03-29 Ochirkhand Erdene-Ochir , Marine Minier , Fabrice Valois , Apostolos Kountouris