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Pre-trained language models (PLMs) have proven to be effective for document re-ranking task. However, they lack the ability to fully interpret the semantics of biomedical and health-care queries and often rely on simplistic patterns for…

Computation and Language · Computer Science 2023-05-09 Deepak Gupta , Dina Demner-Fushman

Relation Extraction (RE) serves as a crucial technology for transforming unstructured text into structured information, especially within the framework of Knowledge Graph development. Its importance is emphasized by its essential role in…

Computation and Language · Computer Science 2024-06-27 Dawulie Jinensibieke , Mieradilijiang Maimaiti , Wentao Xiao , Yuanhang Zheng , Xiaobo Wang

Information Extraction (IE) is crucial for converting unstructured data into structured formats like Knowledge Graphs (KGs). A key task within IE is Relation Extraction (RE), which identifies relationships between entities in text. Various…

Computation and Language · Computer Science 2024-06-25 Sefika Efeoglu , Adrian Paschke

This study applies Large Language Models (LLMs) to two foundational Electronic Health Record (EHR) data science tasks: structured data querying (using programmatic languages, Python/Pandas) and information extraction from unstructured…

Computation and Language · Computer Science 2026-01-29 Juan Jose Rubio Jan , Jack Wu , Julia Ive

Relation extraction (RE) aims to identify relations between entities mentioned in texts. Although large language models (LLMs) have demonstrated impressive in-context learning (ICL) abilities in various tasks, they still suffer from poor…

Computation and Language · Computer Science 2024-04-30 Guozheng Li , Peng Wang , Wenjun Ke , Yikai Guo , Ke Ji , Ziyu Shang , Jiajun Liu , Zijie Xu

Real-world data, such as news articles, social media posts, and chatbot conversations, is inherently dynamic and non-stationary, presenting significant challenges for constructing real-time structured representations through knowledge…

Computation and Language · Computer Science 2025-08-26 Sefika Efeoglu , Adrian Paschke , Sonja Schimmler

Relation Extraction (RE) aims at recognizing the relation between pairs of entities mentioned in a text. Advances in LLMs have had a tremendous impact on NLP. In this work, we propose a textual data augmentation framework called PGA for…

Computation and Language · Computer Science 2024-06-03 Yang Zhou , Shimin Shan , Hongkui Wei , Zhehuan Zhao , Wenshuo Feng

The rapid advancement of large language models (LLMs) has opened new boundaries in the extraction and synthesis of medical knowledge, particularly within evidence synthesis. This paper reviews the state-of-the-art applications of LLMs in…

Large Language Models (LLMs) have been widely applied in various professional fields. By fine-tuning the models using domain specific question and answer datasets, the professional domain knowledge and Q\&A abilities of these models have…

Computation and Language · Computer Science 2024-07-17 Qimin Yang , Rongsheng Wang , Jiexin Chen , Runqi Su , Tao Tan

Dialogue relation extraction (DRE) aims to extract relations between two arguments within a dialogue, which is more challenging than standard RE due to the higher person pronoun frequency and lower information density in dialogues. However,…

Computation and Language · Computer Science 2024-04-30 Guozheng Li , Zijie Xu , Ziyu Shang , Jiajun Liu , Ke Ji , Yikai Guo

For Relation Extraction (RE), the manual annotation of training data may be prohibitively expensive, since the sentences that contain the target relations in texts can be very scarce and difficult to find. It is therefore beneficial to…

Computation and Language · Computer Science 2025-09-11 Zexuan Li , Hongliang Dai , Piji Li

Large Language Models (LLMs) have swiftly emerged as vital resources for different applications in the biomedical and healthcare domains; however, these models encounter issues such as generating inaccurate information or hallucinations.…

Computation and Language · Computer Science 2024-05-06 Mingchen Li , Halil Kilicoglu , Hua Xu , Rui Zhang

Modeling semantic relevance has always been a challenging and critical task in natural language processing. In recent years, with the emergence of massive amounts of annotated data, it has become feasible to train complex models, such as…

Computation and Language · Computer Science 2025-05-13 Min Li , Chun Yuan

This comprehensive survey delves into the latest advancements in Relation Extraction (RE), a pivotal task in natural language processing essential for applications across biomedical, financial, and legal sectors. This study highlights the…

Computation and Language · Computer Science 2025-07-03 Jose A. Diaz-Garcia , Julio Amador Diaz Lopez

Large pre-trained language models have demonstrated their proficiency in storing factual knowledge within their parameters and achieving remarkable results when fine-tuned for downstream natural language processing tasks. Nonetheless, their…

Computation and Language · Computer Science 2023-09-29 Konstantinos Andriopoulos , Johan Pouwelse

Large language models (LLMs) are capable of many natural language tasks, yet they are far from perfect. In health applications, grounding and interpreting domain-specific and non-linguistic data is crucial. This paper investigates the…

Computation and Language · Computer Science 2024-04-30 Yubin Kim , Xuhai Xu , Daniel McDuff , Cynthia Breazeal , Hae Won Park

Building high-quality datasets and labeling query-document relevance are essential yet resource-intensive tasks, requiring detailed guidelines and substantial effort from human annotators. This paper explores the use of small, fine-tuned…

Information Retrieval · Computer Science 2025-04-15 Quentin Fitte-Rey , Matyas Amrouche , Romain Deveaud

Document-Level Biomedical Relation Extraction (Bio-RE) aims to identify relations between biomedical entities within extensive texts, serving as a crucial subfield of biomedical text mining. Existing Bio-RE methods struggle with…

Computation and Language · Computer Science 2025-01-10 Yufei Shang , Yanrong Guo , Shijie Hao , Richang Hong

Relation extraction (RE) is an important task that aims to identify the relationships between entities in texts. While large language models (LLMs) have revealed remarkable in-context learning (ICL) capability for general zero and few-shot…

Computation and Language · Computer Science 2024-04-30 Guozheng Li , Peng Wang , Jiajun Liu , Yikai Guo , Ke Ji , Ziyu Shang , Zijie Xu

Large Language Models (LLMs) have demonstrated impressive performance in biomedical relation extraction, even in zero-shot scenarios. However, evaluating LLMs in this task remains challenging due to their ability to generate human-like…

Computation and Language · Computer Science 2025-06-03 Md Tahmid Rahman Laskar , Israt Jahan , Elham Dolatabadi , Chun Peng , Enamul Hoque , Jimmy Huang
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