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Tree Ensemble (TE) models, such as Gradient Boosted Trees, often achieve optimal performance on tabular datasets, yet their lack of transparency poses challenges for comprehending their decision logic. This paper introduces TE2Rules (Tree…

Machine Learning · Computer Science 2024-01-25 G Roshan Lal , Xiaotong Chen , Varun Mithal

In this paper, we present a nonlinear analysis software toolkit, which can help in biomechanical gait data analysis by implementing various nonlinear statistical analysis algorithms. The toolkit is proposed to tackle the need for an…

Emerging Technologies · Computer Science 2023-11-14 Shifat Sarwar , Aaron Likens , Nick Stergiou , Spyridon Mastorakis

The R programming language is built on an ecosystem of packages, some that allow analysts to accomplish the same tasks. For example, there are at least two clear workflows for creating data visualizations in R: using the base graphics…

Other Statistics · Statistics 2019-03-06 Leslie Myint , Aboozar Hadavand , Leah Jager , Jeffrey Leek

Probabilistic logical models are a core component of neurosymbolic AI and are important in their own right for tasks that require high explainability. Unlike neural networks, logical theories that underlie the model are often handcrafted…

Artificial Intelligence · Computer Science 2025-10-07 Jonathan Feldstein , Dominic Phillips , Efthymia Tsamoura

The increasing importance of Computational Science and Engineering has highlighted the need for high-quality scientific software. However, research software development is often hindered by limited funding, time, staffing, and technical…

Software Engineering · Computer Science 2025-03-10 Armin Ariamajd , Raquel López-Ríos de Castro , Andrea Volkamer

Difficulty replicating baselines, high computational costs, and required domain expertise create persistent barriers to clinical AI research. To address these challenges, we introduce PyHealth 2.0, an enhanced clinical deep learning toolkit…

Hyperbox-based machine learning algorithms are an important and popular branch of machine learning in the construction of classifiers using fuzzy sets and logic theory and neural network architectures. This type of learning is characterised…

Machine Learning · Computer Science 2022-10-07 Thanh Tung Khuat , Bogdan Gabrys

Scikit-learn is an increasingly popular machine learning li- brary. Written in Python, it is designed to be simple and efficient, accessible to non-experts, and reusable in various contexts. In this paper, we present and discuss our design…

Increasingly more research areas rely on machine learning methods to accelerate discovery while saving resources. Machine learning models, however, usually require large datasets of experimental or computational results, which in certain…

Machine Learning · Computer Science 2024-10-24 Elizaveta Surzhikova , Jonny Proppe

Reinforcement learning (RL) is a versatile framework for optimizing long-term goals. Although many real-world problems can be formalized with RL, learning and deploying a performant RL policy requires a system designed to address several…

libact is a Python package designed to make active learning easier for general users. The package not only implements several popular active learning strategies, but also features the active-learning-by-learning meta-algorithm that assists…

Machine Learning · Computer Science 2017-10-03 Yao-Yuan Yang , Shao-Chuan Lee , Yu-An Chung , Tung-En Wu , Si-An Chen , Hsuan-Tien Lin

Survival analysis, a foundational tool for modeling time-to-event data, has seen growing integration with machine learning (ML) approaches to handle the complexities of censored data and time-varying risks. Despite these advances,…

Quantitative Methods · Quantitative Biology 2025-02-05 Giovanni Birolo , Ivan Rossi , Flavio Sartori , Cesare Rollo , Tiziana Sanavia , Piero Fariselli

The classification problem's complexity assessment is an essential element of many topics in the supervised learning domain. It plays a significant role in meta-learning -- becoming the basis for determining meta-attributes or…

Machine Learning · Computer Science 2022-07-15 Joanna Komorniczak , Pawel Ksieniewicz

Software developers often struggle to update APIs, leading to manual, time-consuming, and error-prone processes. We introduce MELT, a new approach that generates lightweight API migration rules directly from pull requests in popular library…

Software Engineering · Computer Science 2024-07-10 Daniel Ramos , Hailie Mitchell , Inês Lynce , Vasco Manquinho , Ruben Martins , Claire Le Goues

Systematicity, i.e., the ability to recombine known parts and rules to form new sequences while reasoning over relational data, is critical to machine intelligence. A model with strong systematicity is able to train on small-scale tasks and…

Artificial Intelligence · Computer Science 2022-05-16 Shengyao Lu , Bang Liu , Keith G. Mills , Shangling Jui , Di Niu

Reinforcement learning (RL) algorithms, due to their reliance on external systems to learn from, require digital environments (e.g., simulators) with very simple interfaces, which in turn constrain significantly the implementation of such…

Programming Languages · Computer Science 2025-04-29 Massimo Fioravanti , Samuele Pasini , Giovanni Agosta

The R arules package implements a comprehensive infrastructure for representing, manipulating, and analyzing transaction data and patterns using frequent itemsets and association rules. The package also provides a wide range of interest…

Databases · Computer Science 2023-05-25 Michael Hahsler

We introduce milearn, a Python package for multi-instance learning (MIL) that follows the familiar scikit-learn fit/predict interface while providing a unified framework for both classical and neural-network-based MIL algorithms for…

Machine Learning · Computer Science 2025-12-02 Dmitry Zankov , Pavlo Polishchuk , Michal Sobieraj , Mario Barbatti

Logic rules are powerful for expressing complex reasoning and analysis problems. At the same time, they are inconvenient or impossible to use for many other aspects of applications. Integrating rules in a language with sets and functions,…

Programming Languages · Computer Science 2022-05-31 Yanhong A. Liu , Scott D. Stoller , Yi Tong , Bo Lin , K. Tuncay Tekle

Managing issue reports is essential for the evolution and maintenance of software systems. However, manual issue management tasks such as triaging, prioritizing, localizing, and resolving issues are highly resource-intensive for projects…

Software Engineering · Computer Science 2025-02-10 Ahmed Adnan , Antu Saha , Oscar Chaparro