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Encoding data as a set of unordered strings is receiving great attention as it captures one of the basic features of DNA storage systems. However, the challenge of constructing optimal redundancy codes for this channel remained elusive. In…

Information Theory · Computer Science 2023-08-16 Jin Sima , Netanel Raviv , Jehoshua Bruck

We consider the problem of estimating the unknown response function in the multichannel deconvolution model with a boxcar-like kernel which is of particular interest in signal processing. It is known that, when the number of channels is…

Statistics Theory · Mathematics 2011-03-18 Marianna Pensky , Theofanis Sapatinas

A setup involving zero-delay sequential transmission of a vector Markov source over a burst erasure channel is studied. A sequence of source vectors is compressed in a causal fashion at the encoder, and the resulting output is transmitted…

Information Theory · Computer Science 2014-10-10 Farrokh Etezadi , Ashish Khisti , Mitchell Trott

We develop several analytical lower bounds on the capacity of binary insertion and deletion channels by considering independent uniformly distributed (i.u.d.) inputs and computing lower bounds on the mutual information between the input and…

Information Theory · Computer Science 2015-03-17 Mojtaba Rahmati , Tolga M. Duman

The inverse source problem where an unknown source is to be identified from the knowledge of its radiated wave is studied. The focus is placed on the effect that multi-frequency data has on establishing uniqueness. In particular, it is…

Analysis of PDEs · Mathematics 2014-01-03 Sebastian Acosta , Sum Chow , James Taylor , Vianey Villamizar

Suppose a binary string x = x_1...x_n is being broadcast repeatedly over a faulty communication channel. Each time, the channel delivers a fixed number m of the digits (m<n) with the lost digits chosen uniformly at random, and the order of…

Probability · Mathematics 2019-02-20 Benjamin Graham

We consider the problem of assembling a sequence based on a collection of its substrings observed through a noisy channel. The mathematical basis of the problem is the construction and design of sequences that may be discriminated based on…

Information Theory · Computer Science 2015-11-04 Han Mao Kiah , Gregory J. Puleo , Olgica Milenkovic

Motivated by the study of deletion channels, this work presents improved bounds on the number of subsequences obtained from a binary sting X of length n under t deletions. It is known that the number of subsequences in this setting strongly…

Information Theory · Computer Science 2012-02-09 Y. Liron , M. Langberg

In the trace reconstruction problem our goal is to learn an unknown string $x\in \{0,1\}^n$ given independent traces of $x$. A trace is obtained by independently deleting each bit of $x$ with some probability $\delta$ and concatenating the…

Data Structures and Algorithms · Computer Science 2024-12-02 Anders Aamand , Allen Liu , Shyam Narayanan

This work addresses the problem of error concealment in video transmission systems over noisy channels employing Bregman divergences along with regularization. Error concealment intends to improve the effects of disturbances at the…

Computer Vision and Pattern Recognition · Computer Science 2016-11-11 Alessandra M. Coelho , Vania V. Estrela , Felipe P. do Carmo , Sandro R. Fernandes

Multi-segment reconstruction (MSR) problem consists of recovering a signal from noisy segments with unknown positions of the observation windows. One example arises in DNA sequence assembly, which is typically solved by matching short reads…

Signal Processing · Electrical Eng. & Systems 2018-02-27 Mona Zehni , Minh N. Do , Zhizhen Zhao

We consider the zero-error capacity of deletion channels. Specifically, we consider the setting where we choose a codebook ${\cal C}$ consisting of strings of $n$ bits, and our model of the channel corresponds to an adversary who may delete…

Information Theory · Computer Science 2011-02-02 Ian A. Kash , Michael Mitzenmacher , Justin Thaler , Jonathan Ullman

We present a method for the reconstruction of networks, based on the order of nodes visited by a stochastic branching process. Our algorithm reconstructs a network of minimal size that ensures consistency with the data. Crucially, we show…

Data Structures and Algorithms · Computer Science 2010-06-07 Nick Fyson , Tijl De Bie , Nello Cristianini

We consider the problem of block-coded communication, where in each block, the channel law belongs to one of two disjoint sets. The decoder is aimed to decode only messages that have undergone a channel from one of the sets, and thus has to…

Information Theory · Computer Science 2015-09-08 Nir Weinberger , Neri Merhav

The problem of reconstructing a string from its error-prone copies, the trace reconstruction problem, was introduced by Vladimir Levenshtein two decades ago. While there has been considerable theoretical work on trace reconstruction,…

Computational Complexity · Computer Science 2020-10-14 Vinnu Bhardwaj , Pavel A. Pevzner , Cyrus Rashtchian , Yana Safonova

Sequence-to-sequence transduction is the core problem in language processing applications as diverse as semantic parsing, machine translation, and instruction following. The neural network models that provide the dominant solution to these…

Computation and Language · Computer Science 2021-06-09 Ekin Akyürek , Jacob Andreas

We consider deletion correcting codes over a q-ary alphabet. It is well known that any code capable of correcting s deletions can also correct any combination of s total insertions and deletions. To obtain asymptotic upper bounds on code…

Information Theory · Computer Science 2013-07-30 Daniel Cullina , Negar Kiyavash

Memoryless channels with deletion errors as defined by a stochastic channel matrix allowing for bit drop outs are considered in which transmitted bits are either independently deleted with probability $d$ or unchanged with probability…

Information Theory · Computer Science 2012-11-13 Mojtaba Rahmati , Tolga M. Duman

We study the problem of synthesising a two-user broadcast channel using a common message, where each output terminal shares an independent source of randomness with the input terminal. This generalises two problems studied in the literature…

Information Theory · Computer Science 2024-05-09 Malhar A. Managoli , Vinod M. Prabhakaran

Distribution-preserving integrated sensing and communication with secure reconstruction is investigated in this paper. In addition to the distortion constraint, we impose another constraint on the distance between the reconstructed sequence…

Information Theory · Computer Science 2024-07-11 Yiqi Chen , Tobias Oechtering , Holger Boche , Mikael Skoglund , Yuan Luo
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